>YPR016C TIF6 SGDID:S000006220, Chr XVI from 593066-592329, reverse
           complement, Verified ORF, "Constituent of 66S
           pre-ribosomal particles, has similarity to human
           translation initiation factor 6 (eIF6); may be involved
           in the biogenesis and or stability of 60S ribosomal
           subunits"
          Length = 245

 Score =  275 bits (704), Expect = 5e-79
 Identities = 137/239 (57%), Positives = 174/239 (72%), Gaps = 4/239 (1%)

Query: 1   MAIRVQFENSNEVGVFSRLTNSYALVALGGSENFSSVFESELSQHIPLVYTTIGGTRVIG 60
           MA R QFENSNE+GVFS+LTN+Y LVA+GGSENF S FE+EL   IP+V+TTI GTR+IG
Sbjct: 1   MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIG 60

Query: 61  RVCVGNRKGLLVSSICTDQELLHLRNCLPENVKIKRIEERLSALGNCITTNDYVGLIHTD 120
           R+  GNR+GLLV +  TDQEL HLRN LP++VKI+R+EERLSALGN I  NDYV L+H D
Sbjct: 61  RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPD 120

Query: 121 IDKETEEIIQDVLDIEVFRTSIAGNLLVGTYSYFTNNGGLLHAMTXXXXXXXXXXXXXXX 180
           ID+ETEE+I DVL +EVFR +I+GN+LVG+Y   +N GGL+H  T               
Sbjct: 121 IDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVP 180

Query: 181 XXTGTINRGSDLIGSGLVANDWSAFCGMDTTAIELSIIEKVFKLNNI----TDNNMEDT 235
              GT+NRGS ++G+G+V ND+ A  G+DTTA ELS+IE +F+L +        N+ DT
Sbjct: 181 LVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRLQDAQPESISGNLRDT 239

Lambda     K      H
   0.319    0.136    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 256
Number of extensions: 8
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 245
Length adjustment: 24
Effective length of query: 223
Effective length of database: 221
Effective search space:    49283
Effective search space used:    49283
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)