Query= PF13_0182 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein (1838 letters)
>YKL210W UBA1 SGDID:S000001693, Chr XI from 39164-42238, Verified ORF,
            "Ubiquitin activating enzyme, involved in
            ubiquitin-mediated protein degradation and essential for
            viability"
          Length = 1024

 Score = 95.1 bits (235), Expect = 4e-23
 Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 32/295 (10%)

Query: 793  GCVQVVDYDYIEESNLSRQFLFRTKDINKLKCQIACENIKMINDDINCDFLKMKVDDTIF 852
            G + V D D IE+SNL+RQFLFR KD+ K K ++A E +  +N D     LK K++  I 
Sbjct: 464  GYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAMNPD-----LKGKINAKI- 517

Query: 853  DNKDFLLKRYLLFTNKKNEIVKKQKTKNIRENPLICILCLDNLKSRILMDKFCLLNSIPL 912
                          +K     ++    +  E+       LDN+ +R  +D+ C+    PL
Sbjct: 518  --------------DKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPL 563

Query: 913  IESGIEGLKASSQVVYPFCSETYXXXXXXXXXXXXLFDEEKSNSCTITSFPRNHKHIIEF 972
            +ESG  G K ++QV+ P  +E+Y               E+    CT+ SFP    H I +
Sbjct: 564  LESGTLGTKGNTQVIIPRLTESYSSSRDP--------PEKSIPLCTLRSFPNKIDHTIAW 615

Query: 973  AKSVYNNMFYENVVKMNKFINDPLYFLGELCKYENILDVXXXXXXXXXXXXXXXXXXXSN 1032
            AKS++   F ++   +N ++  P +    L +  ++  V                     
Sbjct: 616  AKSLFQGYFTDSAENVNMYLTQPNFVEQTLKQSGDVKGVLESISDSLSSKPHNFEDCIKW 675

Query: 1033 IQTLWNSIFVHNILNLL----KNSKQEEIVQYFDSLHKLPQPIYFNKDNKYHINF 1083
             +  +   F H+I  LL    K++K      ++    + P P+ F+  N  H +F
Sbjct: 676  ARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHF 730

 Score = 67.0 bits (162), Expect = 1e-14
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 612 EKKDISNEIINQFCSCAHIELSPFSFFWGALLSQQILKGITHKFKPIHQMFYYDRRDLFP 671
           E  D++ ++I +    A  ++     F+G L++Q++LK  + KF P+ Q  Y+D  +  P
Sbjct: 339 EGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLESLP 398

Query: 672 F-------SNISKMYYGKYMHEKNFFGEEFHKFLKKLNILLIGSGALGCEFLKLLAISGV 724
                      ++    +Y ++   FG +F K +    + L+GSGA+GCE LK  A+ G+
Sbjct: 399 DPKNFPRNEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGL 458

Query: 725 SSNMD 729
            S  D
Sbjct: 459 GSGSD 463

 Score = 57.4 bits (137), Expect = 9e-12
 Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 7/156 (4%)

Query: 166 EKKYSRQIYTHGYNEEXXXXXXXXXXXXLNGISCEICKNLSLCGVHEIGIYDNNLLTYED 225
           E  YSRQ+Y  G                L G+  EI KN+ L GV  + ++D   +   D
Sbjct: 16  ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLAD 75

Query: 226 IDNLYLCNKKLVNEQIKSISCVDNIQKLNESCKIKAITTNLYDNILNYD----IVVTVNQ 281
           +   +   +K + ++   ++    + +LN    +  + +   D++        +V T   
Sbjct: 76  LSTQFFLTEKDIGQKRGDVTRA-KLAELNAYVPVNVLDS--LDDVTQLSQFQVVVATDTV 132

Query: 282 KTNFNIKLNNYCRENKKKFICVNTCGLFGRVFIDYG 317
                +K+N +C  +  +FI   T GLFG  F+D G
Sbjct: 133 SLEDKVKINEFCHSSGIRFISSETRGLFGNTFVDLG 168

 Score = 38.9 bits (89), Expect = 3e-06
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)

Query: 1277 LESNKDD-----INFIYSVTNIRCENYNFKKLNMFDFLKISNNIIPSIVTIVSMISALAF 1331
            ++  KDD     I FI + +N R +NY  +  +      I+  IIP+I T  S+++ L  
Sbjct: 819  VDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVN 878

Query: 1332 FEMYKIV 1338
             E+YK++
Sbjct: 879  LELYKLI 885

 Score = 26.9 bits (58), Expect = 0.013
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 683 YMHEKNFFGEEFHKFLKKLNILLIGSGALGCEFLKLLAISGVSS 726
           Y  +    G+E    ++  N+L++G   LG E  K + ++GV S
Sbjct: 19  YSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKS 62

 Score = 24.6 bits (52), Expect = 0.067
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 1060 YFDSLHKLPQPIYFNKDNK 1078
            YFDSL  LP P  F ++ K
Sbjct: 390  YFDSLESLPDPKNFPRNEK 408

 Score = 24.3 bits (51), Expect = 0.087
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 1435 NKNLFYFFNANYEKLKEKSKVIYNQYVNLEDDFITISELKNVDTWTY 1481
            N +L    NA  +K+  +++ I+N       DF+T + L NVD  TY
Sbjct: 506  NPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVT-NALDNVDARTY 551

 Score = 21.6 bits (44), Expect = 0.57
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 797 VVDYDYIEESNLSRQFLFRTKDINKLKCQIACENIKMIN 835
           V D + ++ ++LS QF    KDI + +  +    +  +N
Sbjct: 65  VFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELN 103

 Score = 21.2 bits (43), Expect = 0.74
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 1272 PLIYNLESNKDDINFIYSVTNIRCENYNFK 1301
            PL +++ +N D  +F+ +  ++R  NY  K
Sbjct: 717  PLEFDIYNN-DHFHFVVAGASLRAYNYGIK 745

 Score = 20.4 bits (41), Expect = 1.3
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 261 AITTNLYDNILNYDIVVTVNQKTNFNIKLNNY 292
           A TT+L   ++N ++   ++ KT+     N +
Sbjct: 867 ATTTSLVTGLVNLELYKLIDNKTDIEQYKNGF 898

 Score = 20.4 bits (41), Expect = 1.3
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)

Query: 1740 NITLNELVESIEIVFNVNIQTICVQDKIIYSKFNIPSFKLYNHKYLYDILCDIFKNDKKF 1799
            +I L++L+E  E    + I  +     ++Y+ F  P  KL     L      I +  K  
Sbjct: 936  DIKLSDLIEHFEKDEGLEITMLSYGVSLLYASF-FPPKKLKERLNL-----PITQLVKLV 989

Query: 1800 QARELP---RTFILSIYAYDKLTNKEVVLPDVQVNV 1832
              +++P    T IL I A DK   ++V +P + +++
Sbjct: 990  TKKDIPAHVSTMILEICADDK-EGEDVEVPFITIHL 1024
Lambda     K      H
   0.321    0.138    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3758
Number of extensions: 214
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 12
Length of query: 1838
Length of database: 1024
Length adjustment: 49
Effective length of query: 1789
Effective length of database: 975
Effective search space:  1744275
Effective search space used:  1744275
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 34 (18.6 bits)
S2: 34 (17.7 bits)