Query= PF13_0205 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
tryptophan--tRNA ligase, putative
(632 letters)
>YOL097C WRS1 SGDID:S000005457, Chr XV from 137825-136527, reverse
complement, Verified ORF, "Cytoplasmic tryptophanyl-tRNA
synthetase, aminoacylates tryptophanyl-tRNA"
Length = 432
Score = 369 bits (946), Expect = e-106
Identities = 189/400 (47%), Positives = 254/400 (63%), Gaps = 23/400 (5%)
Query: 232 VTPWDVNINNEE-----GINYNKLIKEFGCSKITENHIKRIEKLTNSKAHHFIRRGIFFS 286
VTPWDV +E I+Y+KLIK+FG + E +KR +++T + HHF+R+G+FFS
Sbjct: 27 VTPWDVEGGVDEQGRAQNIDYDKLIKQFGTKPVNEETLKRFKQVTGREPHHFLRKGLFFS 86
Query: 287 HRDLDFLLNYYEQHKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQEAFNVPLVIQLSDDE 346
RD +L+ YEQ K F++YTGRGPSS SMHLGH+IPF F K+LQE F+VPLVI+L+DDE
Sbjct: 87 ERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVIELTDDE 146
Query: 347 KYLFNQNYSLEYINTLTNENVKDIISVGLNPELTFIFKNTEY-AGYLYPTVLSIHKKTTL 405
K+LF ++ + EN KDII+VG +P+ TFIF + +Y G Y TV+ + ++ T
Sbjct: 147 KFLFKHKLTINDVKNFARENAKDIIAVGFDPKNTFIFSDLQYMGGAFYETVVRVSRQITG 206
Query: 406 NQSMNVFGFNHSDNIGKISYPSFQIAPCFSQCFPNFLG--KNIPCLVPQGIDQDPYFRLS 463
+ + VFGFN SD IGK + S QIA F FPN LG PCL+P IDQDPYFR+
Sbjct: 207 STAKAVFGFNDSDCIGKFHFASIQIATAFPSSFPNVLGLPDKTPCLIPCAIDQDPYFRVC 266
Query: 464 RDIAVKMALHKPVVVHSVFMPGLQGVNXXXXXXXXXXXXXXXXXXXFDHNNSVIFLTDTP 523
RD+A K+ KP ++HS F P LQG + + IF+TDTP
Sbjct: 267 RDVADKLKYSKPALLHSRFFPALQGSTTKMSA---------------SDDTTAIFMTDTP 311
Query: 524 EQIKNKINKYAFSGGGTTIQEHREKGGNLDKDISYQYLRYLLEDDNKLNEIGEKYKKGEM 583
+QI+ KINKYAFSGG + HRE GGN D D++YQYL + +DD L E +KYK GE+
Sbjct: 312 KQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKDDDVFLKECYDKYKSGEL 371
Query: 584 LSGEIKKILIDVLTELVLKHQEKKKSLTDEEISYFFDPNK 623
LSGE+KK+ I+ L E V QE++ + +E + F P+K
Sbjct: 372 LSGEMKKLCIETLQEFVKAFQERRAQVDEETLDKFMVPHK 411
Score = 16.5 bits (31), Expect = 2.5
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 136 INQFKYSTNKESLEVH 151
IN++ +S + S ++H
Sbjct: 318 INKYAFSGGQVSADLH 333
Score = 15.4 bits (28), Expect = 5.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 61 DIKKLIKNKLQECV 74
++KKL LQE V
Sbjct: 375 EMKKLCIETLQEFV 388
Score = 15.0 bits (27), Expect = 7.2
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 177 LLSPIIKIICNENDKKLLDNMNEECTYLNAEDI 209
LLS +K +C E ++ + E ++ E +
Sbjct: 371 LLSGEMKKLCIETLQEFVKAFQERRAQVDEETL 403
Lambda K H
0.319 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 716
Number of extensions: 34
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 4
Length of query: 632
Length of database: 432
Length adjustment: 35
Effective length of query: 597
Effective length of database: 397
Effective search space: 237009
Effective search space used: 237009
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)