Query= PF13_0213 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
subunit protein L6e, putative
(221 letters)
>FBgn0039857 type=protein;
loc=3R:complement(27420646..27421323,
27421770..27421880); ID=FBpp0085166; name=RpL6-PB;
parent=FBgn0039857,FBtr0085805;
dbxref=FlyBase:FBpp0085166,
FlyBase_Annotation_IDs:CG11522-PB,GB_protein:AAF57167.1,
GB_protein:AAF57167;
MD5=ba2930e7c501012c8593accfaaa0cb45; release=r5.1;
species=Dmel; length=262;
Length = 262
Score = 76.3 bits (186), Expect = 5e-19
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 15 GKKKVLVPVNAKKTINKKYFGRKVASKKKYVV-QRKLRKSIEVGKVAIILTGKHMGKRCI 73
G ++ + +K + K F +K SK + +R R+++ G V I+L G+H GKR +
Sbjct: 74 GGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVV 133
Query: 74 ITKILNSGLLAVVGPYEINGVPLKRVDSRYLVVTSTNIFNFENIAKLKDDFLNYAQDIDD 133
+ K+L SGLL V GP+ +N PL+RV RY++ TS+ + ++ K + ++D
Sbjct: 134 LLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKV----DLGAFK-----VPEHLND 184
Query: 134 DSF--IKTLEIXXXXXXXXXXXXEALFMNNVIDKIKEIRKEDPKVQKLEGIQKDIGSLLK 191
F +K + + F+ N E RK+D QK++ + L
Sbjct: 185 AYFRRLKAKKDKKTGEADIFAAKKERFVPN------EQRKKD---------QKEVDAALL 229
Query: 192 PEIL---KNKVFAHYLKSKFTLRNDMVLHKMKF 221
I + K FA YL++ F L + H+M+F
Sbjct: 230 KVIKAHPEGKFFAKYLQNMFALHSSQYPHRMRF 262
Score = 14.2 bits (25), Expect = 2.4
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 69 GKRCIITKILNSGLL 83
GK+ + L G+L
Sbjct: 17 GKKHPVNSYLKGGIL 31
Score = 13.9 bits (24), Expect = 3.2
Identities = 4/6 (66%), Positives = 6/6 (100%)
Query: 94 VPLKRV 99
VP+K+V
Sbjct: 60 VPIKKV 65
Score = 12.3 bits (20), Expect = 9.3
Identities = 5/13 (38%), Positives = 6/13 (46%)
Query: 25 AKKTINKKYFGRK 37
AKK G+K
Sbjct: 7 AKKVAKSAKKGKK 19
Lambda K H
0.319 0.137 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 166
Number of extensions: 14
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 6
Length of query: 221
Length of database: 262
Length adjustment: 23
Effective length of query: 198
Effective length of database: 239
Effective search space: 47322
Effective search space used: 47322
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)