>YLR448W RPL6B SGDID:S000004440, Chr XII from
           1028850-1028864,1029249-1029764, Verified ORF, "Protein
           component of the large (60S) ribosomal subunit, has
           similarity to Rpl6Bp and to rat L6 ribosomal protein;
           binds to 5.8S rRNA"
          Length = 176

 Score = 78.6 bits (192), Expect = 7e-20
 Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 30/195 (15%)

Query: 31  KKYFGRKVASKKKY---VVQRKLRKSIEVGKVAIILTGKHMGKRCIITKILNSGLLAVVG 87
           K Y    VA+ KK    V  +KLR S+  G V I+L G+  GKR +  K L    L V G
Sbjct: 8   KWYPSEDVAAPKKTRKAVRPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLVTG 67

Query: 88  PYEINGVPLKRVDSRYLVVTSTNIFNFENIAKLKDDFLNYAQDIDDDSFIKTLEIXXXXX 147
           P+++NGVPL+RV++RY++ TST +                 + ++ + F   +E      
Sbjct: 68  PFKVNGVPLRRVNARYVIATSTKVS---------------VEGVNVEKF--NVEYFAKEK 110

Query: 148 XXXXXXXEA-LFMNNVIDKIKEIRKEDPKVQKLEGIQKDIGSLLKPEILKNKVFAHYLKS 206
                  EA LF      +IK  R ED KV         +   L  EI K  +   YL +
Sbjct: 111 LTKKEKKEANLFPEQQTKEIKTERVEDQKV---------VDKALLAEIKKTPLLKQYLSA 161

Query: 207 KFTLRNDMVLHKMKF 221
            F+L+N    H +KF
Sbjct: 162 SFSLKNGDKPHLLKF 176

 Score = 18.1 bits (35), Expect = 0.11
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 11  YNVKGKKKVLVP-VNAKKTINKKYFGRKVASKKK 43
           Y +    KV V  VN +K  N +YF ++  +KK+
Sbjct: 83  YVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKE 115

Lambda     K      H
   0.319    0.137    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 9
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 2
Length of query: 221
Length of database: 176
Length adjustment: 20
Effective length of query: 201
Effective length of database: 156
Effective search space:    31356
Effective search space used:    31356
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)