Query= PF13_0214 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) elongation
factor 1-gamma, putative
(434 letters)
>YKL081W TEF4 SGDID:S000001564, Chr XI from
282535-282739,283066-284099, Verified ORF, "Translation
elongation factor EF-1 gamma"
Length = 412
Score = 107 bits (267), Expect = 7e-28
Identities = 64/176 (36%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 263 SDDLAEKKQPKKTNPLDLLPPSNFSLDEWKYKFSNEKDLLNNAMPHFWKTYDPNGFSLYY 322
+DD A K+PK +PL+ L S F LD+WK K+SN+ D A+P FW+ Y+P +S++
Sbjct: 242 ADDAAPAKKPK--HPLEALGKSTFVLDDWKRKYSND-DTRPVALPWFWEHYNPEEYSIWK 298
Query: 323 MKYDKLEDECQISFVACNMAGGFLQRLENNFSKYSFAVVTVLGENKSYDIEGVWLFRGTD 382
+ Y K DE ++F++ N+ GGF RL + +KY F + V GEN + I G + RG D
Sbjct: 299 VGY-KYNDELTLTFMSNNLVGGFFNRLSAS-TKYMFGCLVVYGENNNNGIVGAVMVRGQD 356
Query: 383 IPFEMKDHPSFEYHIFKKLDINNTQDKKIVEEYWCSKETV----DNRPLVDRKVWK 434
P +E + + KLD +DK+ V W + V +++ +VD KV K
Sbjct: 357 FAPAFDVAPDWESYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDKEIVDGKVLK 412
Score = 17.7 bits (34), Expect = 0.71
Identities = 17/97 (17%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
Query: 119 WVDFNTYELEIPMTCYMNNKSCEKSLKHIEDTLKCYNNHLLYNQYMVGNSITIADIFISV 178
W +N E I Y N E TL +N+L+ + S + +F +
Sbjct: 286 WEHYNPEEYSIWKVGYKYND---------ELTLTFMSNNLV-GGFFNRLSASTKYMFGCL 335
Query: 179 ILYFSLNSGALNESIVLKYKNLYRLYDTISNQKQFKY 215
++Y N+ + +++++ ++ +D + + ++Y
Sbjct: 336 VVYGENNNNGIVGAVMVRGQDFAPAFDVAPDWESYEY 372
Score = 15.4 bits (28), Expect = 3.5
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 111 FEEAQVNMWVDFNTYELEIPMTCYMNN 137
+ + ++W Y E+ +T NN
Sbjct: 289 YNPEEYSIWKVGYKYNDELTLTFMSNN 315
Score = 15.4 bits (28), Expect = 3.5
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 214 KYVFAC 219
KY+F C
Sbjct: 329 KYMFGC 334
Lambda K H
0.319 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 421
Number of extensions: 20
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 434
Length of database: 412
Length adjustment: 32
Effective length of query: 402
Effective length of database: 380
Effective search space: 152760
Effective search space used: 152760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)