>YBR181C RPS6B SGDID:S000000385, Chr II from
           592769-592764,592411-591707, reverse complement,
           Verified ORF, "Protein component of the small (40S)
           ribosomal subunit; identical to Rps6Ap and has
           similarity to rat S6 ribosomal protein"
          Length = 236

 Score =  234 bits (596), Expect = 2e-66
 Identities = 117/189 (61%), Positives = 141/189 (74%)

Query: 1   MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNAVPGDSIGEEFTGYVFRITGGNDKQG 60
           MKLNIS P+N  QK+ EIDDE ++  F +KRIG  V G+++G+EF GYVF+I+GGNDKQG
Sbjct: 1   MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60

Query: 61  FPMIQGVLTNNRVRLLFKKGMKCYRPRKKGERKRKSVRGCIVGQDLSALNLTLVKKGVNE 120
           FPM QGVL   R++LL  K + CYRPR+ GERKRKSVRG IVG DL+ L L +VKKG  E
Sbjct: 61  FPMKQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQE 120

Query: 121 IPGLTDKAVGKKLGPKRASKIRKLFNLDKSDDVRKYVIGRAITKNGKTKFIKPKIQRLVT 180
           + GLTD  V K+LGPKRA+ IRK F L K DDVR +VI R +TK  KT    PKIQRLVT
Sbjct: 121 LEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVIRREVTKGEKTYTKAPKIQRLVT 180

Query: 181 EKRLLRKRN 189
            +RL RKR+
Sbjct: 181 PQRLQRKRH 189

Lambda     K      H
   0.317    0.137    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 196
Number of extensions: 3
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 236
Length adjustment: 25
Effective length of query: 281
Effective length of database: 211
Effective search space:    59291
Effective search space used:    59291
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)