Query= PF13_0232 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) Casein kinase
II regulatory subunit, putative
(385 letters)
>FBgn0000259 type=protein;
loc=X:join(11687480..11687551,11687831..11687933,
11688007..11688198,11688852..11689041,
11689138..11689219,11689634..11689642); ID=FBpp0073406;
name=CkIIbeta-PD; parent=FBgn0000259,FBtr0073561;
dbxref=FlyBase_Annotation_IDs:CG15224-PD,
FlyBase:FBpp0073406,GB_protein:AAN09298.1,
GB_protein:AAN09298;
MD5=7a27ff5fd6995d5f2af9952c65806f02; release=r5.1;
species=Dmel; length=215;
Length = 215
Score = 151 bits (381), Expect = 2e-41
Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 19/205 (9%)
Query: 159 VSWIEWFCQLKQNLFLVEVDEDFIRDEFNLIGLQTKVPHFKKLLKIILXXXXXXXXXXXX 218
VSW+ WFC L+ N F EVDED+I+D+FNL GL +VP++++ L +IL
Sbjct: 7 VSWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPED------ 60
Query: 219 XXXXXXXXINRDSEEMYKNKDMHEQNAACLYGLIHSRFILTSKGLALMREKYKSGIYGTC 278
+ E+ DM EQ A LYGLIH+R+ILT++G+A M EKY++G +G C
Sbjct: 61 -----------ELEDNPLQSDMTEQAAEMLYGLIHARYILTNRGIAQMIEKYQTGDFGHC 109
Query: 279 PSIYCENAKLLPTAISEIPKFLSPLLYCPRCCETYYPSKNSLLNQLDGCYFGTSFA-SFF 337
P +YCE+ +LP +S+IP YCP+C + Y P K+S + DG YFGT F F
Sbjct: 110 PRVYCESQPMLPLGLSDIPGEAMVKTYCPKCIDVYTP-KSSRHHHTDGAYFGTGFPHMLF 168
Query: 338 ALSFNIASDKKKVYYTPQICGFTIN 362
+ + + P++ GF I+
Sbjct: 169 MVHPEYRPKRPTNQFVPRLYGFKIH 193
Score = 17.3 bits (33), Expect = 0.41
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 2 EFVSNDESADDIIQDESNEGEVE 24
E V N A D+I D E E+E
Sbjct: 41 EQVPNYRQALDMILDLEPEDELE 63
Lambda K H
0.320 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 189
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 385
Length of database: 215
Length adjustment: 26
Effective length of query: 359
Effective length of database: 189
Effective search space: 67851
Effective search space used: 67851
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)