Query= PF13_0233 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) myosin a (818 letters)
>YAL029C MYO4 SGDID:S000000027, Chr I from 92271-87856, reverse
           complement, Verified ORF, "One of two type V myosins;
           required for mother-specific HO expression, for the bud
           tip localization of ASH1 and IST2 mRNA; facilitates
           growth and orientation of ER tubules along with She3p"
          Length = 1471

 Score =  381 bits (979), Expect = e-109
 Identities = 245/761 (32%), Positives = 407/761 (53%), Gaps = 55/761 (7%)

Query: 98  SFGDIGLLNHTNIPCVLDFLKHRYLKNQIYTTAVPLIVAINPYKDLGNT-TNEWIRRYRD 156
           S  D+  L++ N P VL  +K RY+  QIYT +  +++A NP+  + +  + E I+ Y  
Sbjct: 72  STDDLTTLSYLNEPAVLHAIKKRYMNGQIYTYSGIVLIAANPFDKVDHLYSREMIQNY-S 130

Query: 157 TADHTKLPPHVFTCAREALSNLHGVNKSQTIIVSGESGAGKTEATKQIMRYFAS-----S 211
           +    +L PH+F  A EA   +     +QT++VSGESGAGKT + K IMRYFAS     +
Sbjct: 131 SKRKDELEPHLFAIAEEAYRFMVHEKANQTVVVSGESGAGKTVSAKYIMRYFASVQESNN 190

Query: 212 KSGNMDL-RIQTAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQLVISHEGGIRYGSVVAF 270
           + G +++ +I++ I+A NP++EAFGNAKT RN+NSSRFG+++Q++      IR   +  +
Sbjct: 191 REGEVEMSQIESQILATNPIMEAFGNAKTTRNDNSSRFGKYLQILFDENTTIRGSKIRTY 250

Query: 271 LLEKSRIITQDDNERSYHIFYQFLKGANSTMKSKFGLKGVTEYKLLNP-NSTEVSGVDDV 329
           LLEKSR++ Q + ER+YHIFYQ L+G    +K +  L    +Y   N      ++G+D+ 
Sbjct: 251 LLEKSRLVYQPETERNYHIFYQILEGLPEPVKQELHLSSPKDYHYTNQGGQPNIAGIDEA 310

Query: 330 KDFEEVIESLKNMELSESDIEVIFSIVAGILTLGNVRL-IEKQEAGLSDAAAIMDEDMGV 388
           ++++   ++L  + ++      IF I+AG+L +GN+ + + + +A LS      ++++ +
Sbjct: 311 REYKITTDALSLVGINHETQLGIFKILAGLLHIGNIEMKMTRNDASLSSE----EQNLQI 366

Query: 389 FNKACELMYLDPELIKREILIKVTVAGGTKIEGRWNKNDAEVLKSSLCKAMYEKLFLWII 448
              ACEL+ +DP    + I+ K  V    KI    N N A + + S+ K +Y  LF W++
Sbjct: 367 ---ACELLGIDPFNFAKWIVKKQIVTRSEKIVTNLNYNQALIARDSVAKFIYSTLFDWLV 423

Query: 449 RHLNS-----RIEPEGGFKTFMGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFE 503
            ++N       ++ +    +F+G+LDI+GFE F+ NS EQ  IN  NE LQ+ F   VF+
Sbjct: 424 DNINKTLYDPELDQQDHVFSFIGILDIYGFEHFEKNSFEQFCINYANEKLQQEFNQHVFK 483

Query: 504 RESKLYKDEGISTAELKYTSNKEVINVLCEKGKSVLSYLEDQCLAPGGTDEKFVS---SC 560
            E + Y  E I  + ++++ N+  I+ L E    +LS L+++   P G+DE + S   S 
Sbjct: 484 LEQEEYVKEEIEWSFIEFSDNQPCID-LIENKLGILSLLDEESRLPSGSDESWASKLYSA 542

Query: 561 ATNLKENNKFTPAKVASNKNFIIQHTIGPIQYCAESFLLKNKDVLRGDLVEVIKDSPNPI 620
                 N  F+  +    K FI+ H    ++Y  E F+ KN+D +    ++V K + NPI
Sbjct: 543 FNKPPSNEVFSKPRFGQTK-FIVSHYAVDVEYEVEGFIEKNRDSVSLGHLDVFKATTNPI 601

Query: 621 VQQLFEGQ-----------------VIEKGKIAKGSLIGSQFLNQLTSLMNLINSTEPHF 663
            +Q+ + +                 +I      K   +GS F   L  LM +INST  H+
Sbjct: 602 FKQILDNRELRSDDAPEEQNTEKKIMIPARLSQKKPTLGSMFKKSLGELMAIINSTNVHY 661

Query: 664 IRCIKPNENKKPLEWCEPKILIQLHALSILEALVLRQLGYSYRRTFEEFLYQYKFVDIAA 723
           IRCIKPN  KKP E+    +L QL A  +LE + +   G+  R TF+EF+ +Y  +   +
Sbjct: 662 IRCIKPNSEKKPWEFDNLMVLSQLRACGVLETIRISCAGFPSRWTFDEFVQRYFLLTDYS 721

Query: 724 AEDSSVENQ--------NKCVNILKLSGLSESMYKIGKSMVFLKQEGAKILTKIQREKLV 775
                + N         N C +IL  +    + Y+IG + +F K      L K++  K+ 
Sbjct: 722 LWSGILYNPDLPKEAIVNFCQSILDATISDSAKYQIGNTKIFFKAGMLAFLEKLRTNKMN 781

Query: 776 EWENCVSVIEAAILKHKYKQKVNKNIPSLLRVQAHIRKKMV 816
             E C+ +I+  I    Y+ +  + + S+ + Q+ IR  +V
Sbjct: 782 --EICI-IIQKKIRARYYRLQYLQTMESIKKCQSQIRSLLV 819

 Score = 20.8 bits (42), Expect = 0.61
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 424  NKNDAEVLKSSLCKAMYEKLFLWIIRHLN 452
            N+ DA + K  +  +M+ K+F   +++LN
Sbjct: 1281 NEFDAVLCKFQVVDSMHTKIFNDTLKYLN 1309

 Score = 19.2 bits (38), Expect = 1.8
 Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 784  IEAAILKHKYKQKVNKNIPS-LLRVQAHIRKK 814
            I+A +LK+K   K    +P+ +L   A++ K+
Sbjct: 1388 IQAILLKYKPANKGEAGVPNEILNYLANVIKR 1419

 Score = 17.7 bits (34), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 310  VTEYKLLNPNSTEVSG 325
            VTE  L   N TEV+G
Sbjct: 1118 VTEGYLKKVNVTEVNG 1133

 Score = 17.3 bits (33), Expect = 6.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 507  KLYKDEGISTAELKYTSNKEVINVLCE 533
            KL+K+ G       +T   E   VLC+
Sbjct: 1263 KLFKNSGDEKFAKLFTFLNEFDAVLCK 1289
Lambda     K      H
   0.318    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2644
Number of extensions: 126
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 818
Length of database: 1471
Length adjustment: 46
Effective length of query: 772
Effective length of database: 1425
Effective search space:  1100100
Effective search space used:  1100100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.6 bits)
S2: 32 (16.9 bits)