Query= PF13_0233 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) myosin a
(818 letters)
>YAL029C MYO4 SGDID:S000000027, Chr I from 92271-87856, reverse
complement, Verified ORF, "One of two type V myosins;
required for mother-specific HO expression, for the bud
tip localization of ASH1 and IST2 mRNA; facilitates
growth and orientation of ER tubules along with She3p"
Length = 1471
Score = 381 bits (979), Expect = e-109
Identities = 245/761 (32%), Positives = 407/761 (53%), Gaps = 55/761 (7%)
Query: 98 SFGDIGLLNHTNIPCVLDFLKHRYLKNQIYTTAVPLIVAINPYKDLGNT-TNEWIRRYRD 156
S D+ L++ N P VL +K RY+ QIYT + +++A NP+ + + + E I+ Y
Sbjct: 72 STDDLTTLSYLNEPAVLHAIKKRYMNGQIYTYSGIVLIAANPFDKVDHLYSREMIQNY-S 130
Query: 157 TADHTKLPPHVFTCAREALSNLHGVNKSQTIIVSGESGAGKTEATKQIMRYFAS-----S 211
+ +L PH+F A EA + +QT++VSGESGAGKT + K IMRYFAS +
Sbjct: 131 SKRKDELEPHLFAIAEEAYRFMVHEKANQTVVVSGESGAGKTVSAKYIMRYFASVQESNN 190
Query: 212 KSGNMDL-RIQTAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQLVISHEGGIRYGSVVAF 270
+ G +++ +I++ I+A NP++EAFGNAKT RN+NSSRFG+++Q++ IR + +
Sbjct: 191 REGEVEMSQIESQILATNPIMEAFGNAKTTRNDNSSRFGKYLQILFDENTTIRGSKIRTY 250
Query: 271 LLEKSRIITQDDNERSYHIFYQFLKGANSTMKSKFGLKGVTEYKLLNP-NSTEVSGVDDV 329
LLEKSR++ Q + ER+YHIFYQ L+G +K + L +Y N ++G+D+
Sbjct: 251 LLEKSRLVYQPETERNYHIFYQILEGLPEPVKQELHLSSPKDYHYTNQGGQPNIAGIDEA 310
Query: 330 KDFEEVIESLKNMELSESDIEVIFSIVAGILTLGNVRL-IEKQEAGLSDAAAIMDEDMGV 388
++++ ++L + ++ IF I+AG+L +GN+ + + + +A LS ++++ +
Sbjct: 311 REYKITTDALSLVGINHETQLGIFKILAGLLHIGNIEMKMTRNDASLSSE----EQNLQI 366
Query: 389 FNKACELMYLDPELIKREILIKVTVAGGTKIEGRWNKNDAEVLKSSLCKAMYEKLFLWII 448
ACEL+ +DP + I+ K V KI N N A + + S+ K +Y LF W++
Sbjct: 367 ---ACELLGIDPFNFAKWIVKKQIVTRSEKIVTNLNYNQALIARDSVAKFIYSTLFDWLV 423
Query: 449 RHLNS-----RIEPEGGFKTFMGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFE 503
++N ++ + +F+G+LDI+GFE F+ NS EQ IN NE LQ+ F VF+
Sbjct: 424 DNINKTLYDPELDQQDHVFSFIGILDIYGFEHFEKNSFEQFCINYANEKLQQEFNQHVFK 483
Query: 504 RESKLYKDEGISTAELKYTSNKEVINVLCEKGKSVLSYLEDQCLAPGGTDEKFVS---SC 560
E + Y E I + ++++ N+ I+ L E +LS L+++ P G+DE + S S
Sbjct: 484 LEQEEYVKEEIEWSFIEFSDNQPCID-LIENKLGILSLLDEESRLPSGSDESWASKLYSA 542
Query: 561 ATNLKENNKFTPAKVASNKNFIIQHTIGPIQYCAESFLLKNKDVLRGDLVEVIKDSPNPI 620
N F+ + K FI+ H ++Y E F+ KN+D + ++V K + NPI
Sbjct: 543 FNKPPSNEVFSKPRFGQTK-FIVSHYAVDVEYEVEGFIEKNRDSVSLGHLDVFKATTNPI 601
Query: 621 VQQLFEGQ-----------------VIEKGKIAKGSLIGSQFLNQLTSLMNLINSTEPHF 663
+Q+ + + +I K +GS F L LM +INST H+
Sbjct: 602 FKQILDNRELRSDDAPEEQNTEKKIMIPARLSQKKPTLGSMFKKSLGELMAIINSTNVHY 661
Query: 664 IRCIKPNENKKPLEWCEPKILIQLHALSILEALVLRQLGYSYRRTFEEFLYQYKFVDIAA 723
IRCIKPN KKP E+ +L QL A +LE + + G+ R TF+EF+ +Y + +
Sbjct: 662 IRCIKPNSEKKPWEFDNLMVLSQLRACGVLETIRISCAGFPSRWTFDEFVQRYFLLTDYS 721
Query: 724 AEDSSVENQ--------NKCVNILKLSGLSESMYKIGKSMVFLKQEGAKILTKIQREKLV 775
+ N N C +IL + + Y+IG + +F K L K++ K+
Sbjct: 722 LWSGILYNPDLPKEAIVNFCQSILDATISDSAKYQIGNTKIFFKAGMLAFLEKLRTNKMN 781
Query: 776 EWENCVSVIEAAILKHKYKQKVNKNIPSLLRVQAHIRKKMV 816
E C+ +I+ I Y+ + + + S+ + Q+ IR +V
Sbjct: 782 --EICI-IIQKKIRARYYRLQYLQTMESIKKCQSQIRSLLV 819
Score = 20.8 bits (42), Expect = 0.61
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 424 NKNDAEVLKSSLCKAMYEKLFLWIIRHLN 452
N+ DA + K + +M+ K+F +++LN
Sbjct: 1281 NEFDAVLCKFQVVDSMHTKIFNDTLKYLN 1309
Score = 19.2 bits (38), Expect = 1.8
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 784 IEAAILKHKYKQKVNKNIPS-LLRVQAHIRKK 814
I+A +LK+K K +P+ +L A++ K+
Sbjct: 1388 IQAILLKYKPANKGEAGVPNEILNYLANVIKR 1419
Score = 17.7 bits (34), Expect = 5.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 310 VTEYKLLNPNSTEVSG 325
VTE L N TEV+G
Sbjct: 1118 VTEGYLKKVNVTEVNG 1133
Score = 17.3 bits (33), Expect = 6.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 507 KLYKDEGISTAELKYTSNKEVINVLCE 533
KL+K+ G +T E VLC+
Sbjct: 1263 KLFKNSGDEKFAKLFTFLNEFDAVLCK 1289
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2644
Number of extensions: 126
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 818
Length of database: 1471
Length adjustment: 46
Effective length of query: 772
Effective length of database: 1425
Effective search space: 1100100
Effective search space used: 1100100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.6 bits)
S2: 32 (16.9 bits)