Query= PF13_0261 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ATP binding
protein, putative
(439 letters)
>YOR262W YOR262W SGDID:S000005788, Chr XV from 817291-818334,
Uncharacterized ORF, "Protein required for cell
viability"
Length = 347
Score = 100 bits (249), Expect = 7e-26
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 1 MKYGQVVVGPAGSGKSNYCKMMKEFMKIKKRNCYVVNLDSACEEYYYERKKKPINTTYNI 60
M + Q+V+GP GSGKS YC +F R+ VVN+D A + Y
Sbjct: 1 MPFAQIVIGPPGSGKSTYCNGCSQFFNAIGRHSQVVNMDPANDALPYP------------ 48
Query: 61 EKELNXXXXXXXXXXXRNYVEVNNLMEEQNLGPNCALLRSVEILYENSXXXXXXXXXXXX 120
R+++ + +M+EQ LGPN L+ +VE L +
Sbjct: 49 -----------CAVDIRDFITLEEIMQEQQLGPNGGLMYAVESLDNSIDLFILQIKSLVE 97
Query: 121 XXXXFII-DTPGQIELYTHTDYFKKILNIFS----EQNIRLVIVFLIDISFISSNTKLLS 175
+++ D PGQ+EL+TH + NIF E +IR +V LID +++S ++ +S
Sbjct: 98 EEKAYLVFDCPGQVELFTH---HSSLFNIFKKMEKELDIRFCVVNLIDCFYMTSPSQYIS 154
Query: 176 AYLTSLSTMINFELPHINILTKCDLLIS 203
L +L +M+ +LPHIN+ +K D+L S
Sbjct: 155 ILLLALRSMLMMDLPHINVFSKIDMLKS 182
Score = 37.7 bits (86), Expect = 6e-07
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 356 YEKLNDILSLDPHDIIITANKCMSKKYYKLNNAFANIIEDFNLVSFLPLNIYDDDNVDFI 415
Y ++ D+ L+P+ I + + KKY KL ++ DFNLVSF L++ D +++ +
Sbjct: 193 YTEVQDLDYLEPY-IEKEGSSVLGKKYSKLTETIKELVSDFNLVSFEVLSVDDKESMINL 251
Query: 416 INSID 420
ID
Sbjct: 252 QGVID 256
Score = 18.5 bits (36), Expect = 0.35
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 415 IINSIDMIIQYGE 427
+ + IDM+ YGE
Sbjct: 173 VFSKIDMLKSYGE 185
Score = 14.6 bits (26), Expect = 5.1
Identities = 4/13 (30%), Positives = 8/13 (61%)
Query: 328 NNNSIYNSSDEQK 340
+N Y+ +E+K
Sbjct: 295 DNKEKYDKEEEEK 307
Lambda K H
0.318 0.136 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 366
Number of extensions: 21
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 439
Length of database: 347
Length adjustment: 31
Effective length of query: 408
Effective length of database: 316
Effective search space: 128928
Effective search space used: 128928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)