Query= PF13_0268 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal protein L17, putative (203 letters)
>FBgn0029897 type=protein;
           loc=X:complement(6635810..6636289,6637091..6637171);
           ID=FBpp0070943; name=RpL17-PA;
           parent=FBgn0029897,FBtr0070983;
           dbxref=FlyBase:FBpp0070943,
           FlyBase_Annotation_IDs:CG3203-PA,GB_protein:AAF46195.1,
           GB_protein:AAF46195;
           MD5=ac8aff56af05af0bddb89ce79b8e727e; release=r5.1;
           species=Dmel; length=186;
          Length = 186

 Score =  190 bits (482), Expect = 2e-53
 Identities = 92/180 (51%), Positives = 129/180 (71%), Gaps = 5/180 (2%)

Query: 1   MVKYAKKIRNLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPF 60
           M +Y+++  N+ K  K  G +LRVHFKNT+E A+AI+RM L  A++YL  VI++K CVPF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 61  RKYNGGVGRTNQAKEFNHTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVN 120
           R++NGGVGR  QAK++  TQGRWP KS +FLL +L N +ANA+ + LD  +L + H+ VN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 121 KARPGRRRTYKAHGRINPFMSSPCHIQIIAREINKPAKKSLLSNAEKQKKLPFKVTLKKL 180
           +A+  RRRTY+AHGRINP+MSSPCH+++I  E     K+ L+S A   +    K++ KKL
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTE-----KEELVSKATDDEPAKKKLSKKKL 175
Lambda     K      H
   0.319    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 160
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 186
Length adjustment: 20
Effective length of query: 183
Effective length of database: 166
Effective search space:    30378
Effective search space used:    30378
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)