Query= PF13_0268 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal
protein L17, putative
(203 letters)
>FBgn0029897 type=protein;
loc=X:complement(6635810..6636289,6637091..6637171);
ID=FBpp0070943; name=RpL17-PA;
parent=FBgn0029897,FBtr0070983;
dbxref=FlyBase:FBpp0070943,
FlyBase_Annotation_IDs:CG3203-PA,GB_protein:AAF46195.1,
GB_protein:AAF46195;
MD5=ac8aff56af05af0bddb89ce79b8e727e; release=r5.1;
species=Dmel; length=186;
Length = 186
Score = 190 bits (482), Expect = 2e-53
Identities = 92/180 (51%), Positives = 129/180 (71%), Gaps = 5/180 (2%)
Query: 1 MVKYAKKIRNLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPF 60
M +Y+++ N+ K K G +LRVHFKNT+E A+AI+RM L A++YL VI++K CVPF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 61 RKYNGGVGRTNQAKEFNHTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVN 120
R++NGGVGR QAK++ TQGRWP KS +FLL +L N +ANA+ + LD +L + H+ VN
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120
Query: 121 KARPGRRRTYKAHGRINPFMSSPCHIQIIAREINKPAKKSLLSNAEKQKKLPFKVTLKKL 180
+A+ RRRTY+AHGRINP+MSSPCH+++I E K+ L+S A + K++ KKL
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTE-----KEELVSKATDDEPAKKKLSKKKL 175
Lambda K H
0.319 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 160
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 186
Length adjustment: 20
Effective length of query: 183
Effective length of database: 166
Effective search space: 30378
Effective search space used: 30378
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)