Query= PF13_0268 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal
protein L17, putative
(203 letters)
>YJL177W RPL17B SGDID:S000003713, Chr X from
90784-91092,91410-91655, Verified ORF, "Protein
component of the large (60S) ribosomal subunit, nearly
identical to Rpl17Ap and has similarity to E. coli L22
and rat L17 ribosomal proteins"
Length = 184
Score = 159 bits (402), Expect = 3e-44
Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
Query: 1 MVKYAKKIRNLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPF 60
M +Y N K A G LRV FKNT E A+AI +L +A+KYL+ V++ +R +PF
Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPF 60
Query: 61 RKYNGGVGRTNQAKEFNHTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVN 120
R++N +GRT Q KEF T+ RWPAKS KF+ +L N ANAE++ LD +KL + H+ VN
Sbjct: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVN 120
Query: 121 KARPGRRRTYKAHGRINPFMSSPCHIQIIARE----INKPAKKSLLSNAEKQK 169
+A RRRTY+AHGRIN + SSP HI+++ E + K A+K ++ +Q+
Sbjct: 121 QAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQR 173
Lambda K H
0.319 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 124
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 184
Length adjustment: 20
Effective length of query: 183
Effective length of database: 164
Effective search space: 30012
Effective search space used: 30012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)