Query= PF13_0268 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal protein L17, putative (203 letters)
>YJL177W RPL17B SGDID:S000003713, Chr X from
           90784-91092,91410-91655, Verified ORF, "Protein
           component of the large (60S) ribosomal subunit, nearly
           identical to Rpl17Ap and has similarity to E. coli L22
           and rat L17 ribosomal proteins"
          Length = 184

 Score =  159 bits (402), Expect = 3e-44
 Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 4/173 (2%)

Query: 1   MVKYAKKIRNLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPF 60
           M +Y     N  K A   G  LRV FKNT E A+AI   +L +A+KYL+ V++ +R +PF
Sbjct: 1   MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPF 60

Query: 61  RKYNGGVGRTNQAKEFNHTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVN 120
           R++N  +GRT Q KEF  T+ RWPAKS KF+  +L N  ANAE++ LD +KL + H+ VN
Sbjct: 61  RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVN 120

Query: 121 KARPGRRRTYKAHGRINPFMSSPCHIQIIARE----INKPAKKSLLSNAEKQK 169
           +A   RRRTY+AHGRIN + SSP HI+++  E    + K A+K ++    +Q+
Sbjct: 121 QAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQR 173
Lambda     K      H
   0.319    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 124
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 184
Length adjustment: 20
Effective length of query: 183
Effective length of database: 164
Effective search space:    30012
Effective search space used:    30012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)