Query= PF13_0282 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome
subunit, putative
(246 letters)
>FBgn0003150 type=protein;
loc=2R:join(16882496..16882498,16882608..16882813,
16882951..16883536); ID=FBpp0071451; name=Pros29-PA;
parent=FBgn0003150,FBtr0071522;
dbxref=FlyBase:FBpp0071451,
FlyBase_Annotation_IDs:CG9327-PA,GB_protein:AAF46651.1,
GB_protein:AAF46651;
MD5=97f7d9107be4d3d54d2f75cd622282e6; release=r5.1;
species=Dmel; length=264;
Length = 264
Score = 218 bits (556), Expect = 7e-62
Identities = 113/225 (50%), Positives = 149/225 (66%), Gaps = 4/225 (1%)
Query: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGLITKDGVILGADKVFISKLIDKAN 60
MARRYDSRTT FSPEGRLYQVEYA+EAI++A +G++ +DG++L A+ +KL+D A
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 61 NYEKIYKIDKHIFCGVAGLNADANILINQSRLYAQRYLYNYNEVQPVSQLVVQICDIKQS 120
EKIY+++ ++ C VAG+ +DAN+L ++ RL AQRY ++Y EV P QLV +CDIKQ+
Sbjct: 61 PSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQA 120
Query: 121 YTQYGGLRPYGVSFLIGGYDTKDGYQLYHTDPSGNYSGWFATAIGTNNLTASSVLKQEWK 180
YTQYGG RP+GVS L G+D K GYQLY +DPSGNY GW AT IG N A S+LKQE
Sbjct: 121 YTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELA 180
Query: 181 N----DMXXXXXXXXXXXXXXXSTDTEIPKSEKIELAYLTNKDGE 221
+ + + DT EK+E+A L D +
Sbjct: 181 DKENVKLTLADAKDLAIKVLSMTLDTTKLTPEKVEMATLQRVDNK 225
Lambda K H
0.316 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 209
Number of extensions: 6
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 264
Length adjustment: 24
Effective length of query: 222
Effective length of database: 240
Effective search space: 53280
Effective search space used: 53280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)