>YGR135W PRE9 SGDID:S000003367, Chr VII from 761397-762173, Verified
           ORF, "20S proteasome beta-type subunit; the only
           nonessential 20S subunit"
          Length = 258

 Score =  221 bits (564), Expect = 8e-63
 Identities = 110/225 (48%), Positives = 153/225 (68%), Gaps = 2/225 (0%)

Query: 2   ARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGLITKDGVILGADKVFISKLIDKANN 61
           +RRYDSRTT FSPEGRLYQVEYALE+I++A   IG++  DG++L A++   S L+++  +
Sbjct: 3   SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62

Query: 62  YEKIYKIDKHIFCGVAGLNADANILINQSRLYAQRYLYNYNEVQPVSQLVVQICDIKQSY 121
            EK+YK++  I   VAGL ADA ILIN +R++AQ YL  YNE  PV  LV ++ DIKQ Y
Sbjct: 63  TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGY 122

Query: 122 TQYGGLRPYGVSFLIGGYDTKDGYQLYHTDPSGNYSGWFATAIGTNNLTASSVLKQEWKN 181
           TQ+GGLRP+GVSF+  GYD + GYQLY ++PSGNY+GW A ++G N   A ++L+ ++K+
Sbjct: 123 TQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD 182

Query: 182 DMXXXXXXXXXXXXXXXSTDTEIPKSEKIELAYLTN--KDGEVYQ 224
           DM               +TD+     +++E A +     DGEVYQ
Sbjct: 183 DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQ 227

 Score = 16.9 bits (32), Expect = 0.41
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 39  TKDGVILGADKVFISKLIDKANN---YEKIYK 67
           T D   L  D++  + +   AN+   Y+KI+K
Sbjct: 200 TTDSSALTYDRLEFATIRKGANDGEVYQKIFK 231

Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 227
Number of extensions: 13
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 246
Length of database: 258
Length adjustment: 24
Effective length of query: 222
Effective length of database: 234
Effective search space:    51948
Effective search space used:    51948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)