Query= PF13_0304 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) elongation factor 1 alpha (443 letters)
>YBR118W TEF2 SGDID:S000000322, Chr II from 477665-479041, Verified
           ORF, "Translational elongation factor EF-1 alpha; also
           encoded by TEF1; functions in the binding reaction of
           aminoacyl-tRNA (AA-tRNA) to ribosomes"
          Length = 458

 Score =  647 bits (1670), Expect = 0.0
 Identities = 310/454 (68%), Positives = 370/454 (81%), Gaps = 12/454 (2%)

Query: 1   MGKEKTHINLVVIGHVDSGKSTTTGHIIYKLGGIDRRTIEKFEKESAEMGKGSFKYAWVL 60
           MGKEK+HIN+VVIGHVDSGKSTTTGH+IYK GGID+RTIEKFEKE+AE+GKGSFKYAWVL
Sbjct: 1   MGKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVL 60

Query: 61  DKLKAERERGITIDIALWKFETPRYFFTVIDAPGHKDFIKNMITGTSQADVALLVVPAEV 120
           DKLKAERERGITIDIALWKFETP+Y  TVIDAPGH+DFIKNMITGTSQAD A+L++   V
Sbjct: 61  DKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGV 120

Query: 121 GGFEGAFSKEGQTKEHALLAFTLGVKQIVVGVNKMDTVKYSEDRYEEIKKEVKDYLKKVG 180
           G FE   SK+GQT+EHALLAFTLGV+Q++V VNKMD+VK+ E R++EI KE  +++KKVG
Sbjct: 121 GEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVG 180

Query: 181 YQADKVDFIPISGFEGDNLIEKSDKTPWY------------KGRTLIEALDTMEPPKRPY 228
           Y    V F+PISG+ GDN+IE +   PWY            KG+TL+EA+D +E P RP 
Sbjct: 181 YNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRPT 240

Query: 229 DKPLRIPLQGVYKIGGIGTVPVGRVETGILKAGMVLNFAPSAVVSECKSVEMHKEVLEEA 288
           DKPLR+PLQ VYKIGGIGTVPVGRVETG++K GMV+ FAP+ V +E KSVEMH E LE+ 
Sbjct: 241 DKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQG 300

Query: 289 RPGDNIGFNVKNVSVKEIKRGYVASDTKNEPAKGCSKFTAQVIILNHPGEIKNGYTPVLD 348
            PGDN+GFNVKNVSVKEI+RG V  D KN+P KGC+ F A VI+LNHPG+I  GY+PVLD
Sbjct: 301 VPGDNVGFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLD 360

Query: 349 CHTSHISCKFLNIDSKIDKRSGKVVEENPKAIKSGDSALVSLEPKKPMVVETFTEYPPLG 408
           CHT+HI+C+F  +  K D+RSGK +E++PK +KSGD+ALV   P KPM VE F+EYPPLG
Sbjct: 361 CHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLG 420

Query: 409 RFAIRDMRQTIAVGIIKSVEKKEPGAVTAKAPAK 442
           RFA+RDMRQT+AVG+IKSV+K E  A   KA  K
Sbjct: 421 RFAVRDMRQTVAVGVIKSVDKTEKAAKVTKAAQK 454
Lambda     K      H
   0.315    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 753
Number of extensions: 21
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 458
Length adjustment: 33
Effective length of query: 410
Effective length of database: 425
Effective search space:   174250
Effective search space used:   174250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)