Query= PF13_0309 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein (1218 letters)
>YLR409C UTP21 SGDID:S000004401, Chr XII from 937231-934412, reverse
            complement, Uncharacterized ORF, "Possible U3 snoRNP
            protein involved in maturation of pre-18S rRNA, based on
            computational analysis of large-scale protein-protein
            interaction data"
          Length = 939

 Score = 87.8 bits (216), Expect = 4e-21
 Identities = 109/496 (21%), Positives = 212/496 (42%), Gaps = 70/496 (14%)

Query: 680  YATSVLISSCGHIGIVGYNDGEIHSFNIQSTTYRNEYKLNKYSISSKAHINGNILKLYLY 739
            +  SV +S CG+ G +G ++G I  +N+QS   R +YKL+K +++    ++G   K+   
Sbjct: 462  FVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTG-ISLDGMNRKMVSC 520

Query: 740  GINYFVSASSSKEDTCLRVWNIYTSDLIYVYNIKNEYTNSVEDIHIVSFYHYNILTAVCL 799
            G++  V      + T L    +       VY+  ++                  L A+ L
Sbjct: 521  GLDGIVGFYDFNKSTLLGKLKLDAPITAMVYHRSSD------------------LFALAL 562

Query: 800  SNNHTLILD-IEQKCITRKFHFAFLVTNIIFSKDNRLIFFALQNNTLLIYDIISNTFVDY 858
             +   +++D + Q+ + + +  +  +T   FS + R I  A  ++T+  +D+ +   +D 
Sbjct: 563  DDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWIVSASLDSTIRTWDLPTGGCIDG 622

Query: 859  LLFKNSVTSMVY--DDIYLYTAHKNSYNFVYSFTNKNLFNKYNYYVSDYKSFHAIPIEVF 916
            ++  N  T++ +  +   L T H    N +  +TN+  F                   V 
Sbjct: 623  IIVDNVATNVKFSPNGDLLATTHVTG-NGICIWTNRAQFK-----------------TVS 664

Query: 917  SDTEDEKSYNIMNIKDLINMNEQSEDNLNNNINEKLSKHDEPINESEKNDYVNIMETYTS 976
            + T DE  +  M    L + + +  D++ +   E  S   E +N+ + N       TYTS
Sbjct: 665  TRTIDESEFARM---ALPSTSVRGNDSMLSGALE--SNGGEDLNDIDFN-------TYTS 712

Query: 977  SENQINKNLITLSGFNISKIAYLIFLDKIKDKCKVEENVKRNDEIPFFLSTKLDKNIEYK 1036
             E QI+K L+TLS    SK+  L+ LD I+ + K +E  K+++++PFFL    +K     
Sbjct: 713  LE-QIDKELLTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFLQLSGEK---VG 768

Query: 1037 DDKEEQFLQNVTNNLENKTXXXXXXXXXXXXXXXXXXXXXXXIVKSKHIGKNSKIQIPSS 1096
            D+       +V   + ++T                          +  +G  S     + 
Sbjct: 769  DE------ASVREGIAHETPEEIHRRDQEAQKKLDAEEQMNKFKVTGRLGFESHF---TK 819

Query: 1097 KLQEILSKNEESYIKVLKYFKSLSPSGIHYNILCLSTKEELENMMNF---FIYHVKTNDN 1153
            +L+E      + Y  +L    + SP+ +   I  L++ E  + ++ F       +K+N N
Sbjct: 820  QLRE--GSQSKDYSSLLATLINFSPAAVDLEIRSLNSFEPFDEIVWFIDALTQGLKSNKN 877

Query: 1154 VDLIQAYLFIFLKAHG 1169
             +L + ++ +  KAHG
Sbjct: 878  FELYETFMSLLFKAHG 893

 Score = 31.6 bits (70), Expect = 3e-04
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%)

Query: 92  NIKEEHQDENIYTE-KNYKNIIPSKESNLLIANGTTGIIVHNGIMCLSMKGIQPFIITSV 150
           ++K+   +E++ +  KN K   P +    +I N + G+    G +     G   +I+T V
Sbjct: 4   DLKKRKVEEDVRSRGKNSKIFSPFR----IIGNVSNGVPFATGTL-----GSTFYIVTCV 54

Query: 151 KNSFCVYDPHKLRKAFLSEYFL-EDIKNLYSTNNFVYVIFKRQVYKINDNGNKKIFSDHH 209
             +F +YD + L   F+SE      I  L +  ++VY  ++ +V        + +     
Sbjct: 55  GKTFQIYDANTLHLLFVSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELET 114

Query: 210 KYNIINILITSDYL 223
             N+ ++ I  DYL
Sbjct: 115 DANVEHLCIFGDYL 128

 Score = 26.6 bits (57), Expect = 0.011
 Identities = 24/126 (19%), Positives = 57/126 (45%), Gaps = 28/126 (22%)

Query: 355 TTNENKIYLYNIN--KEKIIHE-YKAINILCLNEEKYIKIITPTLKNEELCIITSSNELY 411
           +T++N I++Y  +  ++K   E Y  + +  +   + + +        +L ++T SN L 
Sbjct: 131 STDDNSIFIYKKSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKLTVVTKSNVL- 189

Query: 412 ILDIEKDQIVYTKNIHMNDDFVSCVSFYTYQFNDEMNY--------IILIGTENGKLLMI 463
           + ++   ++V+T N                +F D++          II +GT  G+++M 
Sbjct: 190 LFNVRTGKLVFTSN----------------EFPDQITTAEPAPVLDIIALGTVTGEVIMF 233

Query: 464 NLKNNQ 469
           N++  +
Sbjct: 234 NMRKGK 239

 Score = 22.7 bits (47), Expect = 0.15
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 354 ITTNENKIYLYNINKEKIIHEYKAINILCLNEEKYIKIITPTLKNEELCIITSSNE 409
           + T+   +  Y++++   IH  K I+      E Y  +   T  N +  I+TS  +
Sbjct: 266 VGTSSGDLIFYDLDRRSRIHVLKNIH-----RESYGGVTQATFLNGQPIIVTSGGD 316

 Score = 18.5 bits (36), Expect = 2.9
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 453 IGTENGKLLMINLKNNQYFIRRDVHDYVKT-ILVSGQG-YIYTCGYD 497
           IG+ NG + + N+++     +  +H    T I + G    + +CG D
Sbjct: 477 IGSSNGSITIYNMQSGILRKKYKLHKRAVTGISLDGMNRKMVSCGLD 523

 Score = 16.9 bits (32), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1086 GKNSKIQIP 1094
            GKNSKI  P
Sbjct: 18   GKNSKIFSP 26
Lambda     K      H
   0.316    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2299
Number of extensions: 137
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 1218
Length of database: 939
Length adjustment: 45
Effective length of query: 1173
Effective length of database: 894
Effective search space:  1048662
Effective search space used:  1048662
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.5 bits)
S2: 32 (16.9 bits)