Query= PF13_0310 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein (734 letters)
>YDL153C SAS10 SGDID:S000002312, Chr IV from 183019-181187, reverse
           complement, Verified ORF, "Component of the small
           (ribosomal) subunit (SSU) processosome required for
           pre-18S rRNa processing; essential nucleolar protein
           that, when overproduced, disrupts silencing"
          Length = 610

 Score = 49.3 bits (116), Expect = 6e-10
 Identities = 47/180 (26%), Positives = 70/180 (38%), Gaps = 33/180 (18%)

Query: 581 DDFVSYKK---------FDKNKQKTFNTNEYKDQQNNTYGKKKIHDEIDDEHIKNMLNXX 631
           DD + YK+          D+ +++  + N   D  +  YG        +DE +   +N  
Sbjct: 437 DDDIPYKERLFERQQRLLDEARKRGMHDNNGADLDDKDYGS-------EDEAVSRSINTQ 489

Query: 632 XXXXXXXXXXXXXXNKQIRKKLVDE---------------ENEEVD-RRMPNQKIMQNKG 675
                         +K+I +K   +               EN   D +R  N +I++NKG
Sbjct: 490 GENDYYQQVQRGKQDKKISRKEAHKNAVIAAREGKLAELAENVSGDGKRAINYQILKNKG 549

Query: 676 LVRKRKSTDGNARVHNRFKYMKKMKVYNSQHAKLKVHDNN-YSGEKRGINPYLKKSVDIK 734
           L  KR   + N+RV  R KY K  K   S  A      +  Y GEK GI   L +SV  K
Sbjct: 550 LTPKRNKDNRNSRVKKRKKYQKAQKKLKSVRAVYSGGQSGVYEGEKTGIKKGLTRSVKFK 609

 Score = 17.7 bits (34), Expect = 1.9
 Identities = 5/11 (45%), Positives = 9/11 (81%)

Query: 654 VDEENEEVDRR 664
           +DE++E +D R
Sbjct: 66  MDEDDESIDER 76

 Score = 17.3 bits (33), Expect = 2.4
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 652 KLVDEENEEVDRRMPNQKIMQNKGLVRKRKSTDGNAR 688
           K+  +EN++ DR   +  I   + L  +++     AR
Sbjct: 422 KIDQQENKKTDRFKGDDDIPYKERLFERQQRLLDEAR 458

 Score = 16.9 bits (32), Expect = 3.2
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 578 NPNDDFVSYKKFDKNKQKTFNTNEYKDQQN 607
           N  DDF S ++     Q TF  +   D  +
Sbjct: 24  NEVDDFASKREKVLLGQSTFGDSNKDDDHS 53

 Score = 16.9 bits (32), Expect = 3.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 655 DEENEEVDRRMPNQKI 670
           +EE EE+D     +KI
Sbjct: 81  EEEEEELDGAAAYKKI 96

 Score = 16.5 bits (31), Expect = 4.1
 Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)

Query: 591 KNKQKTFNTNEYKDQQNNTYGKKKIHDEIDDEHIKN 626
           K   +  N N+Y D++      K    E D    KN
Sbjct: 153 KKHLEELNMNDYLDEEEEEEWVKSA-KEFDMGEFKN 187

 Score = 16.2 bits (30), Expect = 5.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)

Query: 646 NKQIRKKLVDEENEE 660
           NK     L+++E+EE
Sbjct: 47  NKDDDHSLLEDEDEE 61

 Score = 16.2 bits (30), Expect = 5.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 646 NKQIRKKLVDEENEEVD 662
           +++ R+   +EE E+VD
Sbjct: 352 DEEERESDEEEEEEDVD 368

 Score = 16.2 bits (30), Expect = 5.4
 Identities = 5/18 (27%), Positives = 13/18 (72%)

Query: 189 DKQEEIKQLVMSEQQEYL 206
           D++EE + + + + +EY+
Sbjct: 359 DEEEEEEDVDIDDFEEYV 376

 Score = 15.8 bits (29), Expect = 7.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 653 LVDEENEEV 661
           L DE+ EEV
Sbjct: 55  LEDEDEEEV 63
Lambda     K      H
   0.311    0.130    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 931
Number of extensions: 54
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 12
Length of query: 734
Length of database: 610
Length adjustment: 39
Effective length of query: 695
Effective length of database: 571
Effective search space:   396845
Effective search space used:   396845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)