Query= PF13_0316 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S13
(151 letters)
>FBgn0010265 type=protein;
loc=2L:complement(8363821..8364125,8364188..8364315,
8364541..8364563); ID=FBpp0099990; name=RpS13-PB;
parent=FBgn0010265,FBtr0100541;
dbxref=FlyBase_Annotation_IDs:CG13389-PB,
FlyBase:FBpp0099990,GB_protein:ABC65883.1,
GB_protein:ABC65883;
MD5=64e6acba0b4cb2697fd1862d9d26fa02; release=r5.1;
species=Dmel; length=151;
Length = 151
Score = 203 bits (517), Expect = 8e-58
Identities = 96/151 (63%), Positives = 122/151 (80%)
Query: 1 MGRMYGKGKGISSSTLPYKRKQPSWLKQKPSEIEDAIIKLAKKGQTPSQIGATLRDNYGI 60
MGRM+ GKGIS S LPY+R PSWLK ++++ I KL KKG TPS+IG LRD++G+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60
Query: 61 PQVKSVTGNKILRILRAQGIATTIPEDLYFLIKKAVSMRKHLEKNKKDKDCKFRLILTES 120
QV+ V GNKILRI+++ G+ IPEDLY +IKKAV++RKHLE+N+KDKD KFRLIL ES
Sbjct: 61 AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120
Query: 121 KIHRISRYYKRKKLLPSNWKYQSSTASALIA 151
+IHR++RYYK K +LP NWKY+SSTASAL+A
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALVA 151
Lambda K H
0.316 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 151
Length adjustment: 16
Effective length of query: 135
Effective length of database: 135
Effective search space: 18225
Effective search space used: 18225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)