Query= PF13_0316 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S13
(151 letters)
>YDR064W RPS13 SGDID:S000002471, Chr IV from
579455-579475,580015-580449, Verified ORF, "Protein
component of the small (40S) ribosomal subunit; has
similarity to E. coli S15 and rat S13 ribosomal
proteins"
Length = 151
Score = 201 bits (510), Expect = 5e-57
Identities = 92/150 (61%), Positives = 119/150 (79%)
Query: 1 MGRMYGKGKGISSSTLPYKRKQPSWLKQKPSEIEDAIIKLAKKGQTPSQIGATLRDNYGI 60
MGRM+ GKGISSS +PY R P+W K + + I+K A+KG TPSQIG LRD +G+
Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPAWFKLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGV 60
Query: 61 PQVKSVTGNKILRILRAQGIATTIPEDLYFLIKKAVSMRKHLEKNKKDKDCKFRLILTES 120
Q + +TGNKI+RIL++ G+A IPEDLY+LIKKAVS+RKHLE+N+KDKD KFRLIL ES
Sbjct: 61 TQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIES 120
Query: 121 KIHRISRYYKRKKLLPSNWKYQSSTASALI 150
+IHR++RYY+ +LP NWKY+S+TASAL+
Sbjct: 121 RIHRLARYYRTVAVLPPNWKYESATASALV 150
Lambda K H
0.316 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 151
Length adjustment: 16
Effective length of query: 135
Effective length of database: 135
Effective search space: 18225
Effective search space used: 18225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)