>YBR088C POL30 SGDID:S000000292, Chr II from 425760-424984, reverse
           complement, Verified ORF, "Proliferating cell nuclear
           antigen (PCNA), functions as the sliding clamp for DNA
           polymerase delta; may function as a docking site for
           other proteins required for mitotic and meiotic
           chromosomal DNA replication and for DNA repair"
          Length = 258

 Score =  150 bits (379), Expect = 3e-41
 Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 14/270 (5%)

Query: 1   MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQALDGNXXXXXXXXXXDSGFSHY 60
           MLEAK   AS+ K++ +  KD V   N    E G+  QA+D +             F  Y
Sbjct: 1   MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY 60

Query: 61  RCDRERVLGVNIASLNKVFKLCGAN-ESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLM 119
           RCD    LG+++ SL+K+ + CG N +++ + + +  D++  +FE+ K+D++  +SLKLM
Sbjct: 61  RCDHPVTLGMDLTSLSKILR-CGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLM 119

Query: 120 SIELDSLNIPDCEEGFDAEVELSSKELTNIFRNLSEFSDTVFIEIDSNCIKFTTKGIVGD 179
            I+ D L I + +  +D+ + L S E + I R+LS+ SD++ I I    IKF   G +G 
Sbjct: 120 DIDADFLKIEELQ--YDSTLSLPSSEFSKIVRDLSQLSDSINIMITKETIKFVADGDIGS 177

Query: 180 AEVALKPRDSTSEDDIGVTIKSKKKIKQSFAIKYLNLFSKSNILADVVVLGLSDSRPIEF 239
             V +KP       +  + ++  + +  +F  KYL    K + L+D V + LS   P  F
Sbjct: 178 GSVIIKPFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALF 237

Query: 240 KYEIKDTSPDSDTLKIGFVKFFLAPKMDDD 269
           +++          LK GF++FFLAPK +D+
Sbjct: 238 QFD----------LKSGFLQFFLAPKFNDE 257

 Score = 20.0 bits (40), Expect = 0.055
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 188 DSTSEDDIGVTIKSKKKIKQSFAIKYLNL---FSKSNILADVVVLGLSDSRPIEFKYEIK 244
           D+T +  I +   +KK     +++K +++   F K   L     L L  S   EF   ++
Sbjct: 93  DNTPDSIILLFEDTKKDRIAEYSLKLMDIDADFLKIEELQYDSTLSLPSS---EFSKIVR 149

Query: 245 DTSPDSDTLKIGFVKFFLAPKMDDDM 270
           D S  SD++ I   K  +    D D+
Sbjct: 150 DLSQLSDSINIMITKETIKFVADGDI 175

Lambda     K      H
   0.315    0.134    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 223
Number of extensions: 14
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 274
Length of database: 258
Length adjustment: 25
Effective length of query: 249
Effective length of database: 233
Effective search space:    58017
Effective search space used:    58017
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.4 bits)
S2: 21 (12.7 bits)