>YPL235W RVB2 SGDID:S000006156, Chr XVI from 103232-104647, Verified
           ORF, "Essential protein involved in transcription
           regulation; component of chromatin remodeling complexes;
           required for assembly and function of the INO80 complex;
           member of the RUVB-like protein family"
          Length = 471

 Score =  506 bits (1302), Expect = e-148
 Identities = 251/444 (56%), Positives = 339/444 (76%), Gaps = 5/444 (1%)

Query: 5   EVKDIQKIERIGAHSHIRGLGLNDCLDARYCSEGMIGQMSARKAAGIVLRMIKEGRISGR 64
           E  D++ +  I AHSHI GLGL++ L  R  SEGM+GQ+ AR+AAG++L+M++ G I+GR
Sbjct: 10  ETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGR 69

Query: 65  AILLAGQPGTGKTAIAMGIAKALGEDTPFTHISGSEVYSLEMSKTEALTQAFRRSIGVRV 124
           A+L+AG P TGKTA+AMG++++LG+D PFT I+GSE++SLE+SKTEALTQAFR+SIG+++
Sbjct: 70  AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKI 129

Query: 125 KXXXXXXXXXXXXXXXXKFNERDINNKNKKLGKMILKTTEMETLYDLGSKMIEALQKENI 184
           K                   +R I   +K+ GK+ +KTT+MET+Y+LG+KMI+ L KE +
Sbjct: 130 KEETELIEGEVVEIQI----DRSITGGHKQ-GKLTIKTTDMETIYELGNKMIDGLTKEKV 184

Query: 185 TAGDVICIDXXXXXXXXXXXSFARSKDYDAMDPNTLFVQCPEGELQKRKEVVHTVTLHDI 244
            AGDVI ID           SFARS+DYDAM  +T FVQCPEGELQKRK VVHTV+LH+I
Sbjct: 185 LAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEI 244

Query: 245 DAINSRTQGFLALFSGDTGEIKNEIREHIDMKINEWQEDEKAEIVPGVLFIDEVHMLDIE 304
           D INSRTQGFLALF+GDTGEI++E+R+ I+ K+ EW+E+ KAEIVPGVLFIDEVHMLDIE
Sbjct: 245 DVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIE 304

Query: 305 CFSYLNRALESEQSPIVIMATNRGITHIRGTDYKAPHGIPLDLLDRTLIIPTYPYKHQDI 364
           CFS++NRALE E +PIV+MATNRG++  RGT+YK+PHG+PLDLLDR++II T  Y  Q+I
Sbjct: 305 CFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYNEQEI 364

Query: 365 LKILEQRAEEEDVDIDEYAKELLCKIASESSLRYALHLITLANLVSKKRKATEVTVQDVR 424
             IL  RA+EE+V++   A +LL K   E+SLRY+ +LI++A  ++ KRK   V V+DV+
Sbjct: 365 KTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVK 424

Query: 425 RVYNLFIDVKRSTQYLIEYQNEFM 448
           R Y LF+D  RS +Y+ E +++++
Sbjct: 425 RAYLLFLDSARSVKYVQENESQYI 448

Lambda     K      H
   0.316    0.133    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 586
Number of extensions: 21
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 471
Length adjustment: 33
Effective length of query: 450
Effective length of database: 438
Effective search space:   197100
Effective search space used:   197100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)