Query= PF13_0334 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
polynucleotide kinase, putative
(462 letters)
>FBgn0037578 type=protein; loc=3R:complement(4167593..4169164);
ID=FBpp0081343; name=CG9601-PA;
parent=FBgn0037578,FBtr0081854;
dbxref=FlyBase:FBpp0081343,
FlyBase_Annotation_IDs:CG9601-PA,GB_protein:AAF54229.2,
GB_protein:AAF54229;
MD5=ff742b07b167ee363e7f425a20bb4fc4; release=r5.1;
species=Dmel; length=523;
Length = 523
Score = 87.0 bits (214), Expect = 1e-21
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 37 KKIFSFDLDNTLILSR-GFFKPAQNEKDYIFYSDIIEFLKKKHEENYKIMIFSNQKGVSS 95
+KI +D+D T+I ++ G P + I + ++ E LK H++ +KI +F+NQ G++
Sbjct: 164 EKIAGYDMDGTIIKTKSGLVFPKNTDDWQIIFPEVPEKLKNLHKDGFKICLFTNQGGIAR 223
Query: 96 GKLSLSNLINRVDDIIEKIGLPLECYLALKNDKYRKPRIGMYLFATQNYKQNL----DEV 151
GK++L + ++ I+ K+G+P++ ++A+ + YRKP GM+ + D
Sbjct: 224 GKINLDDFKVKIKHIVAKLGVPIQVFIAIGDGFYRKPLTGMWQHLKSEMNDGVEIQEDRC 283
Query: 152 IYVGDNANRIYDEKFKQEFINHLKYIYSKNNVNININDIYKRLKKDYTDTDLKFALNINA 211
+VGD A R K + +KD++ D FA N+
Sbjct: 284 FFVGDAAGRPETGKGA------------------------TKRRKDHSLVDRLFAANVGI 319
Query: 212 KFYTPEDLFL 221
FYTPE FL
Sbjct: 320 SFYTPEVHFL 329
Score = 60.5 bits (145), Expect = 1e-13
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 301 KLIILIGPPGCGKTFLCTNYFST--YIRINMEEYKTISKCIQVLKEKLLQRKNVIIDNVN 358
+++I++G PG GK+ C+++F Y +N + + C+ K L ++ ++DN N
Sbjct: 366 EMVIMVGLPGSGKSHFCSSFFQPRGYKIVNADTLGSTQNCLTACKRFLDSGQSCVVDNTN 425
Query: 359 SLIKNRLLYINEAKKINQNIEIRLIYFNYSKELIIHLNTFKLITDKTNKFNDVPTIAIHS 418
+R ++ A + + I R + N + H F+ ++D + + +
Sbjct: 426 VDAASRKKFLQLASE--KMIPCRCLVMNVPVAQVKHNIAFRELSDSAR--TKIKDMVFNM 481
Query: 419 FYKYVQEPSKDENVDHIIVLKDENFVPTKFESEEQKKLFFMYL 461
K QEP+ DE I + NF P F E+Q+KL+ MYL
Sbjct: 482 MKKKYQEPALDEG---FISIHKVNFKP-NFADEKQEKLYKMYL 520
Score = 16.9 bits (32), Expect = 1.7
Identities = 5/21 (23%), Positives = 13/21 (61%)
Query: 59 QNEKDYIFYSDIIEFLKKKHE 79
QN + + + D++E + +H+
Sbjct: 92 QNGERELKHGDLVEIVYGRHQ 112
Lambda K H
0.320 0.140 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 539
Number of extensions: 24
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 462
Length of database: 523
Length adjustment: 34
Effective length of query: 428
Effective length of database: 489
Effective search space: 209292
Effective search space used: 209292
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.9 bits)
S2: 26 (14.6 bits)