Query= PF14_0027 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal S27a,
putative
(149 letters)
>FBgn0003942 type=protein;
loc=2L:join(10409731..10410051,10410241..10410390);
ID=FBpp0079606; name=RpS27A-PA;
parent=FBgn0003942,FBtr0080016;
dbxref=FlyBase:FBpp0079606,
FlyBase_Annotation_IDs:CG5271-PA,GB_protein:AAF52941.1,
GB_protein:AAF52941;
MD5=7371c2dfa1a71af74897f40e692cbc65; release=r5.1;
species=Dmel; length=156;
Length = 156
Score = 74.3 bits (181), Expect = 8e-19
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 1 MKILINIPYDESLCLESSNINNIKNVKEQIFELKGIPYELQKLYKNGRHLEDEELLEIDK 60
M+I + +++ LE + I+NVK +I + +GIP + Q+L G+ LED L
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 SDYAYTLNLNFGLLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDGKVFRLKRQ 120
TL+L L GGA ++GK+ RL+R+
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRE 120
Query: 121 C--DNCAPGTLMASHFDRDYCGRCHLTIM 147
C +NC G MA+H DR YCG+C+LT +
Sbjct: 121 CPGENCGAGVFMAAHEDRHYCGKCNLTFV 149
Lambda K H
0.320 0.141 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 156
Length adjustment: 17
Effective length of query: 132
Effective length of database: 139
Effective search space: 18348
Effective search space used: 18348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)