>YLR167W RPS31 SGDID:S000004157, Chr XII from 498949-499407,
           Verified ORF, "Fusion protein that is cleaved to yield a
           ribosomal protein of the small (40S) subunit and
           ubiquitin; ubiquitin may facilitate assembly of the
           ribosomal protein into ribosomes; interacts genetically
           with translation factor eIF2B"
          Length = 152

 Score = 67.0 bits (162), Expect = 1e-16
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 2/145 (1%)

Query: 1   MKILINIPYDESLCLESSNINNIKNVKEQIFELKGIPYELQKLYKNGRHLEDEELLEIDK 60
           M+I +     +++ LE  + + I NVK +I + +GIP + Q+L   G+ LED   L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  SDYAYTLNLNFGLLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDGKVFRLKRQ 120
                TL+L   L GG                                  +GKV +L+R+
Sbjct: 61  IQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVLSYYKVDAEGKVTKLRRE 120

Query: 121 CDN--CAPGTLMASHFDRDYCGRCH 143
           C N  C  G  +A+H DR YCG+CH
Sbjct: 121 CSNPTCGAGVFLANHKDRLYCGKCH 145

Lambda     K      H
   0.320    0.141    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 152
Length adjustment: 16
Effective length of query: 133
Effective length of database: 136
Effective search space:    18088
Effective search space used:    18088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)