Query= PF14_0053 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribonucleotide
reductase small subunit
(349 letters)
>FBgn0011704 type=protein;
loc=2R:complement(7870934..7871815,7872324..7872572,
7872721..7872771); ID=FBpp0087152; name=RnrS-PA;
parent=FBgn0011704,FBtr0088046;
dbxref=FlyBase:FBpp0087152,
FlyBase_Annotation_IDs:CG8975-PA,GB_protein:AAF58599.2,
GB_protein:AAF58599;
MD5=69a4d548ad45df6e1326047d53108d69; release=r5.1;
species=Dmel; length=393;
Length = 393
Score = 385 bits (988), Expect = e-111
Identities = 188/320 (58%), Positives = 243/320 (75%), Gaps = 1/320 (0%)
Query: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
E +L + RF ++PI Y D+W YKKAEASFWT EE+DLS DL D+ +L ++E+HFI H
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
VLAFFAASDGIV ENL +F +EVQITEA+ FY FQIA+EN+HSE YS+LID YI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNS-FAERIVANACVEGILFSGSFCAIFWFKKQ 209
R LF+AIE +PAVK KA WA WI+ ++ F ERI+A A VEGI FSGSF +IFW KK+
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 210 NKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLP 269
+ GLTFSNELISRDEGLH DF L++ L + + + I+++AV +E+ F+ ++LP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALP 313
Query: 270 CDLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADY 329
+LIGMN LMSQYIEFVADRLL LG KI+++KNPFN+M++ISL GKTNFFEK+V +Y
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEKKVGEY 373
Query: 330 QKSGVMAQRKDQVFCLNTEF 349
Q+ GV++ D VF L+ +F
Sbjct: 374 QRMGVVSNPLDNVFTLDADF 393
Lambda K H
0.322 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 398
Number of extensions: 15
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 393
Length adjustment: 30
Effective length of query: 319
Effective length of database: 363
Effective search space: 115797
Effective search space used: 115797
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)