Query= PF14_0068 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) fibrillarin,
putative
(318 letters)
>FBgn0003062 type=protein;
loc=2R:complement(18960584..18961165,18961547..18961986,
18962105..18962117); ID=FBpp0071892; name=Fib-PA;
parent=FBgn0003062,FBtr0071982;
dbxref=FlyBase:FBpp0071892,
FlyBase_Annotation_IDs:CG9888-PA,GB_protein:AAF46950.1,
GB_protein:AAF46950;
MD5=19665765e4e9749a82627001f88e480a; release=r5.1;
species=Dmel; length=344;
Length = 344
Score = 292 bits (748), Expect = 7e-84
Identities = 144/234 (61%), Positives = 174/234 (74%), Gaps = 1/234 (0%)
Query: 86 KSGKVIVV-PHRFPGVYLLKGKSDILVTKNLVPGESVYGEKRYEVMTEDEKIEYRVWNPF 144
K GK + + PHR GV++ +GK D LVT+N VPG VYGEKR V T EKIEYRVWNPF
Sbjct: 106 KGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVETNGEKIEYRVWNPF 165
Query: 145 RSKLGACLMGGVGNMPIKPGSKVLYLGAANGTSVSHVSDMVGDEGVVYAVEFSHRSGRDL 204
RSKL A ++GGV + + PGSKVLYLGAA+GT+VSHVSD+VG EG+VYAVEFSHRSGRDL
Sbjct: 166 RSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDL 225
Query: 205 TNMSKKRSNIVPIVEDARQPTKYRMLXXXXXXXXXXXXQPDQARIVAMNAHMFLKTGGWF 264
N++KKR+NI+PI+EDAR P KYRML QPDQ RIVA+NA FLK GG F
Sbjct: 226 INVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHF 285
Query: 265 IISIKANCVDSTAKPEVVFASEMXXXXXXXXXXXXXLTLEPFHRHHAIVLGMYR 318
+ISIKA+C+DSTA+PE VFA+E+ LTLEP+ R HA+V+G+YR
Sbjct: 286 VISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVVGVYR 339
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 327
Number of extensions: 5
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 344
Length adjustment: 28
Effective length of query: 290
Effective length of database: 316
Effective search space: 91640
Effective search space used: 91640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.5 bits)
S2: 23 (13.5 bits)