Query= PF14_0068 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) fibrillarin, putative (318 letters)
>YDL014W NOP1 SGDID:S000002172, Chr IV from 427361-428344, Verified
           ORF, "Nucleolar protein, component of the small subunit
           processome complex, which is required for processing of
           pre-18S rRNA; has similarity to mammalian fibrillarin"
          Length = 327

 Score =  277 bits (709), Expect = 2e-79
 Identities = 140/236 (59%), Positives = 166/236 (70%), Gaps = 7/236 (2%)

Query: 89  KVIVVPHRFPGVYLLKGKSDILVTKNLVPGESVYGEKRYEVMTEDE-------KIEYRVW 141
           KV++ PHR  GVY+ +GK D+LVTKN+ PGESVYGEKR  V    +       K+EYRVW
Sbjct: 85  KVVIEPHRHAGVYIARGKEDLLVTKNMAPGESVYGEKRISVEEPSKEDGVPPTKVEYRVW 144

Query: 142 NPFRSKLGACLMGGVGNMPIKPGSKVLYLGAANGTSVSHVSDMVGDEGVVYAVEFSHRSG 201
           NPFRSKL A +MGG+  + I PG KVLYLGAA+GTSVSHVSD+VG EGVVYAVEFSHR G
Sbjct: 145 NPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPG 204

Query: 202 RDLTNMSKKRSNIVPIVEDARQPTKYRMLXXXXXXXXXXXXQPDQARIVAMNAHMFLKTG 261
           R+L +M+KKR NI+PI+EDAR P KYRML            QPDQARI+A+N+HMFLK  
Sbjct: 205 RELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNSHMFLKDQ 264

Query: 262 GWFIISIKANCVDSTAKPEVVFASEMXXXXXXXXXXXXXLTLEPFHRHHAIVLGMY 317
           G  +ISIKANC+DST   E VFA E+             LTLEP+ R H IV+G Y
Sbjct: 265 GGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDHCIVVGRY 320
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 333
Number of extensions: 8
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 327
Length adjustment: 28
Effective length of query: 290
Effective length of database: 299
Effective search space:    86710
Effective search space used:    86710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)