Query= PF14_0083 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal protein S8e, putative (218 letters)
>YBL072C RPS8A SGDID:S000000168, Chr II from 89123-88521, reverse
           complement, Verified ORF, "Protein component of the
           small (40S) ribosomal subunit; identical to Rps8Ap and
           has similarity to rat S8 ribosomal protein"
          Length = 200

 Score =  179 bits (455), Expect = 3e-50
 Identities = 98/219 (44%), Positives = 127/219 (57%), Gaps = 22/219 (10%)

Query: 1   MGISRDGRHKLRLTGGXXXXXXXXXXYELGRPPSNTKLGSRQVHVVRGRGRNYKYRAIKL 60
           MGISRD RHK   TG           +ELGR P+NTK+G++++H VR RG N KYRA+++
Sbjct: 1   MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGAKRIHSVRTRGGNKKYRALRI 60

Query: 61  DSGSFSWPTFGISKNTRIIDVVYNASNNELVRTKTLVKNCIVVIDSHPFTTWYENTFGTT 120
           ++G+FSW + GISK TRI  VVY+ SNNELVRT TL K  IV ID+ PF  W+E  +G T
Sbjct: 61  ETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQT 120

Query: 121 LGXXXXXXXXXXXXXXXXXXXXXXXXXXXDETTKTYGVIKK---IGKSKNIDPLLLEQFK 177
           LG                           +   K+    +K      S  I+  +  QF 
Sbjct: 121 LG-------------------KKKNVKEEETVAKSKNAERKWAARAASAKIESSVESQFS 161

Query: 178 QGRVLACISSRPGQCGKADGYIIEGDELLFYKRKMDKKK 216
            GR+ ACISSRPGQ G+ DGYI+EG+EL FY R++  KK
Sbjct: 162 AGRLYACISSRPGQSGRCDGYILEGEELAFYLRRLTAKK 200
Lambda     K      H
   0.318    0.138    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 134
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 3
Length of query: 218
Length of database: 200
Length adjustment: 21
Effective length of query: 197
Effective length of database: 179
Effective search space:    35263
Effective search space used:    35263
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)