>YBL039C URA7 SGDID:S000000135, Chr II from 145731-143992, reverse
           complement, Verified ORF, "Major CTP synthase isozyme
           (see also URA8), catalyzes the ATP-dependent transfer of
           the amide nitrogen from glutamine to UTP, forming CTP,
           the final step in de novo biosynthesis of pyrimidines;
           involved in phospholipid biosynthesis"
          Length = 579

 Score =  355 bits (910), Expect = e-102
 Identities = 195/482 (40%), Positives = 276/482 (57%), Gaps = 55/482 (11%)

Query: 11  IKYIIVTGGNMSGLGKGTAMSSMAVXXXXXXXXXXXXXXDPYLNIDAGTMSPYEHGEVYV 70
           +KY++V+GG +SG+GKG   SS  +              DPY+NIDAGTMSP EHGE +V
Sbjct: 1   MKYVVVSGGVISGIGKGVLASSTGMLMKTLGLKVTSIKIDPYMNIDAGTMSPLEHGECFV 60

Query: 71  LEDGGEVDLDLGNYERFLNIRLTYKNNITSGKIYEEVIKKERKGEYLGKTVQVVPHVTDA 130
           L+DGGE DLDLGNYER+L + LT  +NIT+GKIY  VI KERKG+YLGKTVQ+VPH+T+A
Sbjct: 61  LDDGGETDLDLGNYERYLGVTLTKDHNITTGKIYSHVIAKERKGDYLGKTVQIVPHLTNA 120

Query: 131 IQKWIKDVIDENIKKMKKEYNIDSFNKIPCMCLIEVGGTVGDIESAVYLEAXXXXXXXXX 190
           IQ WI     E + K+     +D     P +C+IE+GGTVGDIESA ++EA         
Sbjct: 121 IQDWI-----ERVAKIP----VDDTGMEPDVCIIELGGTVGDIESAPFVEALRQFQFKVG 171

Query: 191 XDDVCLCHLSYVPIIGNLREQKTKPTQHSVKILREAGLKPDFIFCRCEEPLTQEAIKKIA 250
            ++  L H+S VP+I    EQKTKPTQ ++K LR  GL PD I CRC E L +  I KIA
Sbjct: 172 KENFALIHVSLVPVIHG--EQKTKPTQAAIKGLRSLGLVPDMIACRCSETLDKPTIDKIA 229

Query: 251 LFSQVKNEHVISLHDTSNVYKVP-LILDKQNVCMXXXXXXXXXXXXXXXXXQISPYSFNI 309
           +F  V  E V+++HD ++ Y VP L+L+++ +                   Q      + 
Sbjct: 230 MFCHVGPEQVVNVHDVNSTYHVPLLLLEQKMIDYLHARLKLDEISLTEEEKQRGLELLSK 289

Query: 310 WKQLADRYESSSEQVVIGIVGKYTASNDTYLSIISSLVHACLECGFKLVIKYINSSHLSL 369
           WK     ++ S E V I +VGKYT   D+YLS+I +L H+ ++C  KL IK++ ++ L  
Sbjct: 290 WKATTGNFDESMETVKIALVGKYTNLKDSYLSVIKALEHSSMKCRRKLDIKWVEATDL-- 347

Query: 370 XXXXXXXXXXXXXXARKYSYENFHENSSTEKIIFVDDTTSDEDYDKKRRIKYEKAWETLK 429
                                                   + +  +  + K+ +AW  + 
Sbjct: 348 ----------------------------------------EPEAQESNKTKFHEAWNMVS 367

Query: 430 SVDGVLVPGGFGTRGIEGKYLSSKYCRLHNIPYLGICLGMQIAVIDVAREYL-NVNANSE 488
           + DG+L+PGGFG RG EG  L++++ R ++IP+LG+CLG+QIA I+  R  L   +++S 
Sbjct: 368 TADGILIPGGFGVRGTEGMVLAARWARENHIPFLGVCLGLQIATIEFTRSVLGRKDSHSA 427

Query: 489 EF 490
           EF
Sbjct: 428 EF 429

 Score = 97.8 bits (242), Expect = 2e-24
 Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 5/137 (3%)

Query: 708 YYKSIEEIDNNNVIISMSEFKGDDNKGGTMRLGVKQSKIIDKD--SLTYKAYDEELYIYE 765
           +Y  I+E   N+V++ M E    +  GG+MRLG++ +   ++   S   K Y +   ++E
Sbjct: 429 FYPDIDE--KNHVVVFMPEID-KETMGGSMRLGLRPTFFQNETEWSQIKKLYGDVSEVHE 485

Query: 766 RHRHRYEINPKYVPLLEAVGLTFVAKDIHSVRMEICEIKNLDFYVGVQFHPEFTSRPFKS 825
           RHRHRYEINPK V  LE  GL FV KD    R EI E+KN  +Y+  Q+HPE+TS+    
Sbjct: 486 RHRHRYEINPKMVDELENNGLIFVGKDDTGKRCEILELKNHPYYIATQYHPEYTSKVLDP 545

Query: 826 NPLFLAFVLASKKKLKD 842
           +  FL  V AS   L+D
Sbjct: 546 SKPFLGLVAASAGILQD 562

Lambda     K      H
   0.316    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1174
Number of extensions: 47
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 858
Length of database: 579
Length adjustment: 39
Effective length of query: 819
Effective length of database: 540
Effective search space:   442260
Effective search space used:   442260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.1 bits)
S2: 29 (15.8 bits)