Query= PF14_0104 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) eukaryotic
translation initiation factor 2 gamma subunit, putative
(465 letters)
>YER025W GCD11 SGDID:S000000827, Chr V from 205250-206833, Verified
ORF, "Gamma subunit of the translation initiation factor
eIF2, involved in the identification of the start codon;
binds GTP when forming the ternary complex with GTP and
tRNAi-Met"
Length = 527
Score = 583 bits (1504), Expect = e-171
Identities = 289/452 (63%), Positives = 351/452 (77%), Gaps = 2/452 (0%)
Query: 9 LAEQNLETLDVTKLTPLSEDVISRQATINLGTIGHVAHGKSTLVHAISGVHTVRFKHEKE 68
L EQ L D +KL PLS ++I+RQATIN+GTIGHVAHGKST+V AISGV TVRFK E E
Sbjct: 75 LPEQPLNP-DFSKLNPLSAEIINRQATINIGTIGHVAHGKSTVVRAISGVQTVRFKDELE 133
Query: 69 RNITIKLGYANAKIYKCTNPDCLPPECYKSYESSKEDNPICPRKDCNHEMKLLRHVSFVD 128
RNITIKLGYANAKIYKC P C P+CY+S++S KE +P C R C KL+RHVSFVD
Sbjct: 134 RNITIKLGYANAKIYKCQEPTCPEPDCYRSFKSDKEISPKCQRPGCPGRYKLVRHVSFVD 193
Query: 129 CPGHDILMATMLNGXXXXXXXXXXXXGNESCPQPQTSEHLAAVEIMRLKHILILQNKVEL 188
CPGHDILM+TML+G GNESCPQPQTSEHLAA+EIM+LKH++ILQNKV+L
Sbjct: 194 CPGHDILMSTMLSGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHVIILQNKVDL 253
Query: 189 IKEEQALKQQEEIRNFVSGTXXXXXXXXXXXXVLKYNIDVVCEYIVTQISIPKRDFISSP 248
++EE AL+ Q+ I F+ GT LKYNID V E+IV I +P RDF+ SP
Sbjct: 254 MREESALEHQKSILKFIRGTIADGAPIVPISAQLKYNIDAVNEFIVKTIPVPPRDFMISP 313
Query: 249 HMIVIRSFDVNKPGEDIETLQGGVAGGSILHGVLKVGDKIEIRPGIISKDDKGEITCRPI 308
+IVIRSFDVNKPG +IE L+GGVAGGSIL+GV K+GD+IEIRPGI++KDDKG+I C+PI
Sbjct: 314 RLIVIRSFDVNKPGAEIEDLKGGVAGGSILNGVFKLGDEIEIRPGIVTKDDKGKIQCKPI 373
Query: 309 ISQILSMFAENNNLKYAVPGGLIGVGTKIDPILTRADRLVGQVIGHLNKLPDCFAEIEIS 368
S I+S+FAE N+LK+AVPGGLIGVGTK+DP L RADRLVGQV+G LP+ + +IEI+
Sbjct: 374 FSNIVSLFAEQNDLKFAVPGGLIGVGTKVDPTLCRADRLVGQVVGAKGHLPNIYTDIEIN 433
Query: 369 YYLLRRLLGVKSQDGEKNTKVAKLKNGEFLMINIGSTSIGCRVTGIKTELAKLELTGPVC 428
Y+LLRRLLGVK+ DG+K KV KL+ E LM+NIGST+ G RV +K ++A+L+LT P C
Sbjct: 434 YFLLRRLLGVKT-DGQKQAKVRKLEPNEVLMVNIGSTATGARVVAVKADMARLQLTSPAC 492
Query: 429 TKIGDKIALSRRVDKHWRLIGWGQINKGKPLE 460
T+I +KIALSRR++KHWRLIGW I KG LE
Sbjct: 493 TEINEKIALSRRIEKHWRLIGWATIKKGTTLE 524
Lambda K H
0.318 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 730
Number of extensions: 26
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 527
Length adjustment: 34
Effective length of query: 431
Effective length of database: 493
Effective search space: 212483
Effective search space used: 212483
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)