Query= PF14_0124 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) actin II
(376 letters)
>FBgn0000043 type=protein; loc=2R:complement(1901775..1902905);
ID=FBpp0085365; name=Act42A-PA;
parent=FBgn0000043,FBtr0086029;
dbxref=GB_protein:AAF57294.1,FlyBase:FBpp0085365,
FlyBase_Annotation_IDs:CG12051-PA,GB_protein:AAF57294;
MD5=2399a0c3c4cdf802eb854e0ba9f098c5; release=r5.1;
species=Dmel; length=376;
Length = 376
Score = 597 bits (1539), Expect = e-175
Identities = 283/374 (75%), Positives = 327/374 (87%), Gaps = 1/374 (0%)
Query: 3 EEAVALVVDNGSGMVKSGLAGDDAPKCVFPSIVGRPKMPNIMIGMEQKECYVGDEAQNKR 62
EE ALVVDNGSGM K+G AGDDAP+ VFPSIVGRP+ +M+GM QK+ YVGDEAQ+KR
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
Query: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPEEHPVLLTEAPLNPKTNREKMTQI 122
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+PEEHPVLLTEAPLNPK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 123 MFETFDVPAMYVSIQAILSLYASGRTTGIVLDSGDGVSHTVPIYEGYVLPHAINRIDMAG 182
MFETF+ PAMYV+IQA+LSLYASGRTTGIVLDSGDGVSHTVPIYEGY LPHAI R+D+AG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 183
Query: 183 RDLTYHMMKLFTERGHTFTTTAEREIVRDIKEKLCYIAMDYDEELKRXXXXXXXXXXXXX 242
RDLT ++MK+ TERG++FTTTAEREIVRDIKEKLCY+A+D+++E+
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM-ATAASSSSLEKSYE 242
Query: 243 LPDGNLITVGSERFRCPEALFNPTLIGRECPGLHITAYQSIMKCDIDIRKELYNNIVLSG 302
LPDG +IT+G+ERFRCPE+LF P+ +G E G+H T Y SIMKCD+DIRK+LY N VLSG
Sbjct: 243 LPDGQVITIGNERFRCPESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 303 GTTMYNNIGERLTKEMTNLAPSSMKIKVIAPPERKYSVWIGGSILSSLSTFQQMWITKEE 362
GTTMY I +R+ KE+T LAPS+MKIK++APPERKYSVWIGGSIL+SLSTFQQMWI+K+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 363 YEDSGPSIVHRKCF 376
Y++SGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 15.8 bits (29), Expect = 2.1
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 2 SEEAVALVVDNGSGM 16
S +V+D+G G+
Sbjct: 146 SGRTTGIVLDSGDGV 160
Lambda K H
0.319 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 573
Number of extensions: 14
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 376
Length of database: 376
Length adjustment: 30
Effective length of query: 346
Effective length of database: 346
Effective search space: 119716
Effective search space used: 119716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)