Query= PF14_0127 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding)
N-myristoyltransferase
(410 letters)
>YLR195C NMT1 SGDID:S000004185, Chr XII from 543306-541939, reverse
complement, Verified ORF, "N-myristoyl transferase,
catalyzes the cotranslational, covalent attachment of
myristic acid to the N-terminal glycine residue of
several proteins involved in cellular growth and signal
transduction"
Length = 455
Score = 314 bits (805), Expect = 3e-90
Identities = 182/421 (43%), Positives = 232/421 (55%), Gaps = 39/421 (9%)
Query: 2 NDDKKDFVGRDLYQLIRNAKDKIKIDYKFWYTQPVPKINDEFDENVNE--PFISDNKVED 59
NDD F + K D+KFW TQPV +FDE V E P ED
Sbjct: 21 NDDTSKFT---------QEQKKAMKDHKFWRTQPVK----DFDEKVVEEGPIDKPKTPED 67
Query: 60 VRKEEYKLPSGYAWCVCDITKENDRSDIYNLLTDNYVEDDDNVFRFNYSSEFLLWALSSP 119
+ + L S + WC D+ + D++ LL +NYVED D FRFNY+ EF WAL SP
Sbjct: 68 ISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSP 127
Query: 120 NYVKNWHIGVKYESTNKLVGFISAIPIDMCVNKNIIKMAEVNFLCVHKSLRSKRLAPVLI 179
+ K+WHIGV+ + T KLV FISAIP+ + V + E+NFLCVHK LRSKRL PVLI
Sbjct: 128 GWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLI 187
Query: 180 KEITRRINLESIWQAIYTAGVYLPKPISTARYFHRSINVKKLIEIGFSCLNTRLTMSRAI 239
KEITRR+N IW A+YTAG+ LP P+ST RY HR +N KKL E+ F+ L T I
Sbjct: 188 KEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMI 247
Query: 240 KLYRIDDTLNIKNLRLMKKKDIDGLQKLLNEHLKQYNLHAIFSKEDVAHWF-----TPID 294
+ LR +KK+DID + +L + ++ L IF+KE+ H F P+D
Sbjct: 248 AENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLD 307
Query: 295 -QVIYTYVNEE-NGEIKDLISFYSLPSKVLGNNKYNILNAAFSFYNITTT---------- 342
QVI++YV E+ +G+I D SFYSLP +L N KY L + +Y T
Sbjct: 308 KQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDP 367
Query: 343 -------TTFKNLIQDAICLAKRNNFDVFNALEVMDNYSVFQDLKFGEGDGSLKYYLYNW 395
T LI DA LAK N DVFNAL DN DLKFG GDG L +YL+N+
Sbjct: 368 KATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNY 427
Query: 396 K 396
+
Sbjct: 428 R 428
Score = 14.2 bits (25), Expect = 8.3
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 78 ITKENDRSDIYNLLTDNYVEDDD 100
+++E+ + NLL + +DD
Sbjct: 1 MSEEDKAKKLENLLKLLQLNNDD 23
Lambda K H
0.321 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 597
Number of extensions: 29
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 410
Length of database: 455
Length adjustment: 32
Effective length of query: 378
Effective length of database: 423
Effective search space: 159894
Effective search space used: 159894
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)