>YKL059C MPE1 SGDID:S000001542, Chr XI from 329087-327762, reverse
           complement, Verified ORF, "Essential conserved subunit
           of CPF (cleavage and polyadenylation factor), plays a
           role in 3' end formation of mRNA via the specific
           cleavage and polyadenylation of pre-mRNA, contains a
           putative RNA-binding zinc knuckle motif"
          Length = 441

 Score = 45.4 bits (106), Expect = 6e-09
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 318 PDYICHMCGKKGHSIKNC-TMSSFNNNNKKIKVPTGIPTNFLTKIKTE 364
           P Y+C+ CG + H IKNC T S  N   K+I+  TGIP  FL  I+ +
Sbjct: 178 PGYMCYRCGGRDHWIKNCPTNSDPNFEGKRIRRTTGIPKKFLKSIEID 225

 Score = 18.1 bits (35), Expect = 1.0
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 258 TSSSKVDGEYSTTYHQKNNYLPNTYTHGGT 287
           T   K+     T     N  LP +  +GGT
Sbjct: 372 TKKMKLMDPTGTAGLNNNTSLPTSVNNGGT 401

Lambda     K      H
   0.314    0.131    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 503
Number of extensions: 20
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 743
Length of database: 441
Length adjustment: 36
Effective length of query: 707
Effective length of database: 405
Effective search space:   286335
Effective search space used:   286335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)