Query= PF14_0150 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) RNA polymerase small subunit, putative (96 letters)
>YNL113W RPC19 SGDID:S000005057, Chr XIV from 412773-413201,
           Verified ORF, "RNA polymerase subunit, common to RNA
           polymerases I and III"
          Length = 142

 Score = 85.9 bits (211), Expect = 1e-22
 Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 9/102 (8%)

Query: 2   EEKKYYENLKNLTHAT--------FCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQ 53
           EE+   E +K LT AT        F    EDHTLGN LR ++++   VEF GY++PHP++
Sbjct: 39  EEEPDREKIKLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSE 98

Query: 54  PEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALK 94
             +N+RIQT G+  A+D L++ L DL ++CD++ +KF E +K
Sbjct: 99  NLLNIRIQTYGETTAVDALQKGLKDLMDLCDVVESKFTEKIK 140
Lambda     K      H
   0.318    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 96
Length of database: 142
Length adjustment: 13
Effective length of query: 83
Effective length of database: 129
Effective search space:    10707
Effective search space used:    10707
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)