>YHR040W BCD1 SGDID:S000001082, Chr VIII from 187917-189017,
           Verified ORF, "Essential protein required for the
           accumulation of box C/D snoRNA"
          Length = 366

 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 96  LCTVCGF-EGKYKCLKCFEHKPTSFVRYTCSLNCKKIHDESSCCKSK 141
           LC VCG  E KYKC +C           TCSL C K H     C  +
Sbjct: 4   LCGVCGIKEFKYKCPRCLVQ--------TCSLECSKKHKTRDNCSGQ 42

 Score = 13.5 bits (23), Expect = 3.7
 Identities = 5/19 (26%), Positives = 8/19 (42%)

Query: 92  VKRKLCTVCGFEGKYKCLK 110
           V +K C      G   C++
Sbjct: 201 VFQKCCEFYRLAGTSSCIE 219

 Score = 12.3 bits (20), Expect = 8.3
 Identities = 4/7 (57%), Positives = 5/7 (71%)

Query: 71  EDAFKTK 77
           ED  +TK
Sbjct: 221 EDGSETK 227

 Score = 12.3 bits (20), Expect = 8.3
 Identities = 5/17 (29%), Positives = 9/17 (52%)

Query: 101 GFEGKYKCLKCFEHKPT 117
           G+E  ++  +  EH  T
Sbjct: 296 GYEVLHQEPRPLEHTST 312

 Score = 12.3 bits (20), Expect = 8.3
 Identities = 4/14 (28%), Positives = 8/14 (57%)

Query: 114 HKPTSFVRYTCSLN 127
           H+    + +T +LN
Sbjct: 301 HQEPRPLEHTSTLN 314

Lambda     K      H
   0.321    0.133    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 16
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 146
Length of database: 366
Length adjustment: 23
Effective length of query: 123
Effective length of database: 343
Effective search space:    42189
Effective search space used:    42189
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.2 bits)
S2: 20 (12.3 bits)