Query= PF14_0174 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein, conserved (466 letters)
>YLR175W CBF5 SGDID:S000004165, Chr XII from 506136-507587, Verified
           ORF, "Component of box H/ACA small nucleolar
           ribonucleoprotein particles (snoRNPs), probable rRNA
           pseudouridine synthase, binds to snoRNP Nop10p and also
           interacts with ribosomal biogenesis protein Nop53p"
          Length = 483

 Score =  509 bits (1311), Expect = e-149
 Identities = 239/388 (61%), Positives = 307/388 (79%), Gaps = 2/388 (0%)

Query: 5   KMDYKIEPERKEAAIDTSNWPLLLKNYDKLNIRTSHFTPLPMGNSPYSRNIEEYLKYGII 64
           K D+ I+PE   A+ DTS WPLLLKN+DKL +R+ H+TP+P G+SP  R+++ Y+  G+I
Sbjct: 3   KEDFVIKPEAAGASTDTSEWPLLLKNFDKLLVRSGHYTPIPAGSSPLKRDLKSYISSGVI 62

Query: 65  NLDKPSNPSSHEVVSWIRKILRCEKTGHSGTLDPKVTGVLLVCLNRATRLVKSQQESGKE 124
           NLDKPSNPSSHEVV+WI++ILRCEKTGHSGTLDPKVTG L+VC++RATRLVKSQQ +GKE
Sbjct: 63  NLDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKE 122

Query: 125 YVCVCKFHSKPKSIEEVKLVLNNFQGAIFQRPPLICAVKRQLRVRTIYDSKLLDYDETNN 184
           YVC+ + H   K  +++   L N  GA+FQRPPLI AVKRQLRVRTIY+S L+++D   N
Sbjct: 123 YVCIVRLHDALKDEKDLGRSLENLTGALFQRPPLISAVKRQLRVRTIYESNLIEFDNKRN 182

Query: 185 VCVFWVKCQAGTYIRTLCEHIGLLLGVGAHMQELRRVKSGNMTEYDNMCTLHDILDAQYI 244
           + VFW  C+AGTY+RTLC H+G+LLGVG HMQELRRV+SG ++E DNM TLHD++DAQ++
Sbjct: 183 LGVFWASCEAGTYMRTLCVHLGMLLGVGGHMQELRRVRSGALSENDNMVTLHDVMDAQWV 242

Query: 245 YDTTGDESYLRKIITPLEKLLINFPRIVIKDSAVNAICYGAKLTIPGVLRFDNNIDVNTE 304
           YD T DESYLR II PLE LL+ + RIV+KDSAVNA+CYGAKL IPG+LR++  I++  E
Sbjct: 243 YDNTRDESYLRSIIQPLETLLVGYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDE 302

Query: 305 IVIMTTKGEAVALAIAQMTSTVIATVDHGVVSLTKRVIMDRDTYDVKWGFGNRSMEKKKL 364
           IV++TTKGEA+A+AIAQM++  +A+ DHGVV+  KR IM+RD Y  +WG G  + +KK++
Sbjct: 303 IVLITTKGEAIAVAIAQMSTVDLASCDHGVVASVKRCIMERDLYPRRWGLGPVAQKKKQM 362

Query: 365 ILAGLLDKYGKPNEKTPLSWIKSEGYAP 392
              G LDKYG+ NE TP  W K   Y P
Sbjct: 363 KADGKLDKYGRVNENTPEQWKKE--YVP 388
Lambda     K      H
   0.318    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 701
Number of extensions: 22
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 483
Length adjustment: 33
Effective length of query: 433
Effective length of database: 450
Effective search space:   194850
Effective search space used:   194850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)