Query= PF14_0177 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) DNA replication licensing factor MCM2 (971 letters)
>YBL023C MCM2 SGDID:S000000119, Chr II from 177529-174923, reverse
           complement, Verified ORF, "Protein involved in DNA
           replication; component of the Mcm2-7 hexameric complex
           that binds chromatin as a part of the pre-replicative
           complex"
          Length = 868

 Score =  495 bits (1275), Expect = e-144
 Identities = 290/660 (43%), Positives = 405/660 (61%), Gaps = 67/660 (10%)

Query: 238 DKHTLIVSAKHLIQFHCENLVQWIEFKPEQILEVLHECLMVEAYRISPKLYKGRICKVVL 297
           +  +L V+ +HL +     L  ++   PE++L++  + + +EA  +    Y     ++ +
Sbjct: 238 NSESLEVNYRHLAESKAI-LALFLAKCPEEMLKIF-DLVAMEATELHYPDYARIHSEIHV 295

Query: 298 R--DWPYSTQLRNLRCTELNTLIKVTGVCIKRGYVLPKLRVMYLKCNSCDTTLSEVPIYF 355
           R  D+P    LR LR + L++L++VTGV  +R  V P+L+ +   C  C + L     +F
Sbjct: 296 RISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGP---FF 352

Query: 356 ADGKKPVLPRRCPHCQS-ATFSVDRIKTAYTDYQKITLQESPCSVPAGRAPRQREVVVTG 414
            D  + +    C +C+S   F V+  KT Y +YQ++TLQE+P +VP GR PR REV++  
Sbjct: 353 QDSNEEIRISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLA 412

Query: 415 DLVDKVKPGEEVEVLGIYKTKYDIGLNIKYGFPILQTEIEANNIERKEDIQLSE------ 468
           DLVD  KPGEEVEV GIYK  YD  LN K GFP+  T IEAN+I+R+E    +E      
Sbjct: 413 DLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLD 472

Query: 469 ---LTEXXXXXXXXXXXXPNIRERIITSIAPAIWGHKDIKTSIAYALFGGVQKGGDKSFS 525
               TE              I ++II+S+AP+I+GH+DIKT++A +LFGGV K       
Sbjct: 473 VFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPK------- 525

Query: 526 KNNETNNFGVQNRDILNNFKGGHTIRGDINVLLLGDPGLGKSQVLQYVHKTNLRTVYTTG 585
                            N  G H+IRGDINVLLLGDPG  KSQ+L+YV KT  R V+ TG
Sbjct: 526 -----------------NVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATG 568

Query: 586 KGASAVGLTAGVRKDHTTNEWTLEGGALVLADEGICIIDEFDKMTDKDRVSIHEAMEQQS 645
           +GASAVGLTA VRKD  T EWTLEGGALVLAD+G+C+IDEFDKM D+DR SIHEAMEQQS
Sbjct: 569 QGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQS 628

Query: 646 ISISKAGIVTTLRARCAVIAAANPIYGRYDPSLTFKENVDLSDPILSRFDLITVLRDIPN 705
           ISISKAGIVTTL+ARC++IAAANP  GRY+ +L   +NV L++PILSRFD++ V+RD+ +
Sbjct: 629 ISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVD 688

Query: 706 VDEDFYLAEYVVTNHQLSHPKLENTQNYQKRIENLKNVIVSSS----------------- 748
            + D  LA +VV +H  SHP+ +  +  ++   N ++ I                     
Sbjct: 689 EEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQ 748

Query: 749 -----AYEPIPQDLLQKYIIYARTNCKPSLSDVPYAEISAKLSNFYSRVRQKASASGGYP 803
                   PIPQ+LL KYI YART   P L  +       K+S  Y+ +R+++ ++G +P
Sbjct: 749 RKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMD----KVSRVYADLRRESISTGSFP 804

Query: 804 LTLRHIESIIRIAEANAKMRLSHQIYSKDVDYAIATLLESYVSCQRFAVAKQLSKEFARY 863
           +T+RH+ESI+RIAE+ AKMRLS  + S D+D AI  +++S+V  Q+ +V +QL + FA Y
Sbjct: 805 ITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDAQKVSVRRQLRRSFAIY 864

 Score = 18.5 bits (36), Expect = 2.1
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 9/52 (17%)

Query: 56  DDEKKEMQKLRNLGXXXXXXXXXXXXXXXXXXXXLKARRAAERHMQMQRKQE 107
           +DE +E ++L+N G                     +   A +R +Q QRK+E
Sbjct: 710 NDEDREGEELKNNGESAIEQGEDEIN---------EQLNARQRRLQRQRKKE 752

 Score = 16.5 bits (31), Expect = 8.0
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 702 DIPNVDE 708
           D+P++DE
Sbjct: 57  DVPDIDE 63
Lambda     K      H
   0.318    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1663
Number of extensions: 78
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 3
Length of query: 971
Length of database: 868
Length adjustment: 43
Effective length of query: 928
Effective length of database: 825
Effective search space:   765600
Effective search space used:   765600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.1 bits)
S2: 31 (16.5 bits)