Query= PF14_0194 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding)
spliceosome-associated protein, putative
(484 letters)
>FBgn0015818 type=protein;
loc=X:join(6149944..6149977,6150052..6150135,
6150194..6151119); ID=FBpp0070859; name=Spx-PA;
parent=FBgn0015818,FBtr0070894;
dbxref=FlyBase:FBpp0070859,
FlyBase_Annotation_IDs:CG3780-PA,GB_protein:AAF46136.1,
GB_protein:AAF46136;
MD5=ebff065568eb3fd82f4516dc41491659; release=r5.1;
species=Dmel; length=347;
Length = 347
Score = 204 bits (520), Expect = 3e-57
Identities = 101/192 (52%), Positives = 137/192 (71%), Gaps = 2/192 (1%)
Query: 13 IYERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGYHAGYGFVXXXXXX 72
I ERN +AT+Y LD +V E +L ELF+Q G V NVH+P+D++ H GYGFV
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 73 XXXXAANILNMTKLFGKALRCNKATQDKRSFDVGANLFIGNLDDEVDEKMLFDIFSSFGQ 132
I+NM KL+GK +R NKA+ +++ DVGAN+FIGNLD EVDEK+L+D FS+FG
Sbjct: 66 DADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGV 125
Query: 133 IM-TVKVMRN-EDDTSKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYAFKKDSKGE 190
I+ T K+MR+ E SK FI++ +FE+SD A++ MN Q++CN+ + +SYAFKKD KGE
Sbjct: 126 ILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGE 185
Query: 191 RHGTAAERFIAA 202
RHG+AAER +AA
Sbjct: 186 RHGSAAERLLAA 197
Score = 32.3 bits (72), Expect = 3e-05
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 7 NQEISHIYERNNEATLYIANLDAQVDEEILCELFMQCGNV-KNVHIPRDKINGYHAGYGF 65
N+ +H + A ++I NLD +VDE++L + F G + + I RD G + F
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 66 VXXXXXXXXXXAANILN 82
+ A + +N
Sbjct: 147 INFASFEASDAAMDAMN 163
Score = 15.4 bits (28), Expect = 3.3
Identities = 5/8 (62%), Positives = 5/8 (62%)
Query: 274 PPNPHQPT 281
PP P PT
Sbjct: 327 PPVPFPPT 334
Score = 14.2 bits (25), Expect = 7.4
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 265 ISPIMNNFYPPNPHQPTS 282
+ P M PP QP +
Sbjct: 289 LPPAMGIPPPPRMMQPNA 306
Lambda K H
0.315 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 386
Number of extensions: 27
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 484
Length of database: 347
Length adjustment: 31
Effective length of query: 453
Effective length of database: 316
Effective search space: 143148
Effective search space used: 143148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.8 bits)
S2: 24 (13.9 bits)