Query= PF14_0218 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) actin, putative (522 letters)
>YFL039C ACT1 SGDID:S000001855, Chr VI from 54695-54686,54377-53260,
           reverse complement, Verified ORF, "Actin, structural
           protein involved in cell polarization, endocytosis, and
           other cytoskeletal functions"
          Length = 375

 Score =  120 bits (300), Expect = 1e-31
 Identities = 67/146 (45%), Positives = 95/146 (65%), Gaps = 9/146 (6%)

Query: 379 EEFFELPDGYKINIHKYKYDIAEHLFHSIPSLNNFK--GLPQSIINCIISTDVDIRKELL 436
           E+ +ELPDG  I I   ++   E LFH  PS+   +  G+ Q+  N I+  DVD+RKEL 
Sbjct: 237 EKSYELPDGQVITIGNERFRAPEALFH--PSVLGLESAGIDQTTYNSIMKCDVDVRKELY 294

Query: 437 QSIVITGGSSLFPGLIERLHNSLKEKECFTQSNKFKILNMTSLVEQKYSSWLGGSILASL 496
            +IV++GG+++FPG+ ER+   +        S K KI+   +  E+KYS W+GGSILASL
Sbjct: 295 GNIVMSGGTTMFPGIAERMQKEITALA--PSSMKVKII---APPERKYSVWIGGSILASL 349

Query: 497 GTFQQMWVSKKEYHESGHNIILDRCF 522
            TFQQMW+SK+EY ESG +I+  +CF
Sbjct: 350 TTFQQMWISKQEYDESGPSIVHHKCF 375

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 52/234 (22%)

Query: 17  DISSLVVDLGFYSCKIGHNQEDTPRIFLNSICGEREMND------EYENYM-DGSLKNIN 69
           ++++LV+D G   CK G   +D PR    SI G            + ++Y+ D +     
Sbjct: 4   EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63

Query: 70  YKELKYPLNLYNRNENIRIKPLFYKDDNKDDIKLNADVFEKILEYSIEGIEIPKVFECTD 129
              L+YP+                    +  I  N D  EKI  ++              
Sbjct: 64  ILTLRYPI--------------------EHGIVTNWDDMEKIWHHTF------------- 90

Query: 130 DIIMDPIKLGGLNLNFEEHPILLTEFNMHNHKIREQMTEILFEKYNIPALYFAKKAKLTS 189
                      L +  EEHP+LLTE  M+    RE+MT+I+FE +N+PA Y + +A L+ 
Sbjct: 91  --------YNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSL 142

Query: 190 FSLGRSTSLVIDIGYNSLDINPVYEGYVLQKNSLEYNIGGQ----YFDKLIYEQ 239
           +S GR+T +V+D G     + P+Y G+ L    L  ++ G+    Y  K++ E+
Sbjct: 143 YSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSER 196

 Score = 18.5 bits (36), Expect = 0.46
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 398 DIAEHLFHSIPSLNNFKGLPQSIINC-IISTDVDIRKELLQSIVITGGSSLFPGLIERLH 456
           D  + + H +P    F  LP +I+   +   D+    + L  I+   G S        + 
Sbjct: 154 DSGDGVTHVVPIYAGFS-LPHAILRIDLAGRDLT---DYLMKILSERGYSFSTTAEREIV 209

Query: 457 NSLKEKECFTQ---SNKFKILNMTSLVEQKY 484
             +KEK C+       + +    +S +E+ Y
Sbjct: 210 RDIKEKLCYVALDFEQEMQTAAQSSSIEKSY 240
Lambda     K      H
   0.319    0.138    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 445
Number of extensions: 18
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 4
Length of query: 522
Length of database: 375
Length adjustment: 32
Effective length of query: 490
Effective length of database: 343
Effective search space:   168070
Effective search space used:   168070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)