Query= PF14_0221 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein, conserved
(487 letters)
>YNR053C NOG2 SGDID:S000005336, Chr XIV from
723113-722304,721772-721122, reverse complement,
Verified ORF, "Putative GTPase that associates with
pre-60S ribosomal subunits in the nucleolus and is
required for their nuclear export and maturation"
Length = 486
Score = 330 bits (845), Expect = 9e-95
Identities = 173/407 (42%), Positives = 257/407 (63%), Gaps = 17/407 (4%)
Query: 67 RIEPSIKWFNNTRTISQNKLEIFRNKLEETTHDPFSIVIKRSKIPVELLKDEKNVVTKKY 126
R++P +WF NTR ISQ+ L+ FR+ L ET D + ++++R+K+P+ LL+++ + K
Sbjct: 70 RVQPDRRWFGNTRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKA 129
Query: 127 KNENFLRIEKYHDIYSXXXXXXXXXLNVGTLEEYAKRAEQNLSTYETKN--DNSLIEKRN 184
+ L E Y D + L LE+ K ++++ YE K D +L N
Sbjct: 130 R---ILDTESYADAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDATLGLMGN 186
Query: 185 EIEKK-----FSKDQLLKIGQSKRIWAELYKVIDSSDILLQVLDARDPIGTRCKKLEETL 239
+ +K+ +K+ + GQSKRIW ELYKVIDSSD+++ VLDARDP+GTRCK +EE +
Sbjct: 187 QEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYM 246
Query: 240 KKDRPNKHMILILNKIDLIPVSVAEKWIKILSKDYPTIAYHANINKPFGKSDLFNIIRQY 299
KK+ P+KH+I +LNK DL+P VA W+K LSK+ PT+A+HA+I FGK L ++RQ+
Sbjct: 247 KKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQF 306
Query: 300 TDFFKSQKKKHIHIGLIGYPNVGKSAIINSLKKKVVCISACIPGQTKYWQFIKLTNKIYL 359
+ +K I +G IGYPN GKS+IIN+L+KK VC A IPG+TK WQ+I L +I+L
Sbjct: 307 SQLHTD--RKQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFL 364
Query: 360 IDCPGIVPYDIEDSEK--ILRCTMRLEKITNPHFYIDDIFKMVNLSYILKIYKLPEDLTF 417
IDCPGIVP +DSE+ + R +R+E +T+P YI + K + ++ + Y++ +
Sbjct: 365 IDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYIPGVLKRCQVKHLERTYEIS---GW 421
Query: 418 KNSEEFLEIXXXXXXXXXXXXEPDITSVSKVIINDWIKGKIPYFVNP 464
K++ EF+EI EPD + VSK I+ND+ +GKIP+FV P
Sbjct: 422 KDATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVLP 468
Lambda K H
0.318 0.137 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 581
Number of extensions: 21
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 486
Length adjustment: 34
Effective length of query: 453
Effective length of database: 452
Effective search space: 204756
Effective search space used: 204756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)