>YLL045C RPL8B SGDID:S000003968, Chr XII from 48628-47858, reverse
           complement, Verified ORF, "Ribosomal protein L4 of the
           large (60S) ribosomal subunit, nearly identical to
           Rpl8Ap and has similarity to rat L7a ribosomal protein;
           mutation results in decreased amounts of free 60S
           subunits"
          Length = 256

 Score =  170 bits (430), Expect = 3e-47
 Identities = 90/213 (42%), Positives = 121/213 (56%), Gaps = 4/213 (1%)

Query: 41  NPLIFEKKKRSNIIGVGVRPKKDLSKYVKWPRYXXXXXXXXXXXXXXXVPPSINQFNHTL 100
           NPL     K   I G  V+PK++LS+YVKWP Y               VPP+I QF +TL
Sbjct: 24  NPLTHSTPKNFGI-GQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTL 82

Query: 101 PKSQTQDLLNFLKAYKPESKTDKKQRLLNKAKEALNKNITKDK--KPLFLKYGINHITKL 158
            ++   +       Y+PE+  +KK+RL  +A         +D   KP  +KYG+NH+  L
Sbjct: 83  DRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSL 142

Query: 159 VENKKANLVVIANDVSPIELVLFLPALCRLKEVPYCIVKDKATLGKLVHKKTATAVCLES 218
           +ENKKA LV+IANDV PIELV+FLPALC+   VPY I+K KA LG LV++KT+    L  
Sbjct: 143 IENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIIKGKARLGTLVNQKTSAVAALTE 202

Query: 219 VKKEDQEKLDYFAKVCKENFNDNVD-LRRKWGG 250
           V+ ED+  L         NF D  D +++ WGG
Sbjct: 203 VRAEDEAALAKLVSTIDANFADKYDEVKKHWGG 235

 Score = 13.9 bits (24), Expect = 4.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 110 NFLKAYKPESKTDKKQRLLNKAKEALNK 137
           NF   Y    K      L NKA+  ++K
Sbjct: 221 NFADKYDEVKKHWGGGILGNKAQAKMDK 248

Lambda     K      H
   0.317    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 189
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 282
Length of database: 256
Length adjustment: 25
Effective length of query: 257
Effective length of database: 231
Effective search space:    59367
Effective search space used:    59367
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)