Query= PF14_0240 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L21e, putative
(161 letters)
>YBR191W RPL21A SGDID:S000000395, Chr II from
606265-606275,606664-607135, Verified ORF, "Protein
component of the large (60S) ribosomal subunit, nearly
identical to Rpl21Bp and has similarity to rat L21
ribosomal protein"
Length = 160
Score = 118 bits (296), Expect = 4e-32
Identities = 55/146 (37%), Positives = 90/146 (61%)
Query: 12 TRYKFSKKFRKHGECTANKYLEKLNYGDYVDIVCDSTQQKGMPFNYYHGKTGKIFHITKR 71
TRY F + FRKHG + YL+ GD VDI + + QKGMP +Y GKTG ++++TK
Sbjct: 11 TRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKS 70
Query: 72 GVGVLVNKRVKHRIEQKKVCVRIEHVRKSRCNEDFLLRKIKNAELIKEAKLKNEHINIKR 131
VGV++NK V +R +K++ +R+EH++ S+C ++FL R NA EAK + + +KR
Sbjct: 71 SVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKR 130
Query: 132 KTEGPKPAAMIKVPPSKIITIEPLPF 157
+ P+ + ++ + T+ P+P+
Sbjct: 131 QPAQPRESRIVSTEGNVPQTLAPVPY 156
Lambda K H
0.320 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 160
Length adjustment: 17
Effective length of query: 144
Effective length of database: 143
Effective search space: 20592
Effective search space used: 20592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)