Query= PF14_0289 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L17, putative
(257 letters)
>YJL063C MRPL8 SGDID:S000003599, Chr X from 316392-315676, reverse
complement, Verified ORF, "Mitochondrial ribosomal
protein of the large subunit"
Length = 238
Score = 46.6 bits (109), Expect = 5e-10
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 10 VNLGVRRRLFR-RAHKQPHHKWDSIKNQLNELLKYGRIETTLTKAKELQGYAEELIYLAK 68
+ +G+ R+L R +AH+ +KN +L ++ I +T K KE AE +I K
Sbjct: 1 MTVGIARKLSRDKAHRDA-----LLKNLACQLFQHESIVSTHAKCKEASRVAERIITWTK 55
Query: 69 KDNVENNL--------KVESMLRTAQGRR----RLYEFYVPLYRHRPFFFTRIINQWKLR 116
+ +N +++S L A R RL+ P Y RP +TR++ + + R
Sbjct: 56 RAITTSNSVAQAELKSQIQSQLFLAGDNRKLMKRLFSEIAPRYLERPGGYTRVL-RLEPR 114
Query: 117 LRDSAPLAYIEFIDRP 132
DSAP + +E +D P
Sbjct: 115 ANDSAPQSVLELVDSP 130
Lambda K H
0.323 0.141 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 115
Number of extensions: 6
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 257
Length of database: 238
Length adjustment: 24
Effective length of query: 233
Effective length of database: 214
Effective search space: 49862
Effective search space used: 49862
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)