Query= PF14_0292 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein, conserved
(833 letters)
>YGL099W LSG1 SGDID:S000003067, Chr VII from 314634-316556, Verified
ORF, "Putative GTPase involved in 60S ribosomal subunit
biogenesis; required for the release of Nmd3p from 60S
subunits in the cytoplasm"
Length = 640
Score = 129 bits (324), Expect = 5e-34
Identities = 60/125 (48%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 346 NSRLNKESIDKYEHEYFIEWRKLLSEIEEK-EGYYVTPYEKNIEYWKQLWRVIEKSHVLF 404
N ++K +D+ E E F+EWR+ L+ ++E E +TP+E+NIE WKQLWRV+E+S ++
Sbjct: 143 NEGMSKFQLDRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDLVV 202
Query: 405 YILDVRNPLFFYCPGLEYYIKKVDKRKKLILILNKADFLTYEERKIWAEYFEKKKVPFVF 464
I+D RNPL F LE Y+K+ D RK +L++NKAD LT ++R WA+YF K + F F
Sbjct: 203 QIVDARNPLLFRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKYFISKNISFTF 262
Query: 465 FSALR 469
+SALR
Sbjct: 263 YSALR 267
Score = 119 bits (297), Expect = 7e-31
Identities = 71/172 (41%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 597 PKFMIGFIGFPNVGKSSIINCLIGKKKVSVSRQPGKTKHFQTITLKHFPFSLCDCPGLIF 656
P IG +G+PNVGKSS IN L+G KKVSVS PGKTKHFQTI L LCDCPGL+F
Sbjct: 335 PLINIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSD-SVMLCDCPGLVF 393
Query: 657 PSLVFNKNDLIINGVFSIDHFKGDVVTLVQIICNIIPFKLCNNYKIDTNI---IHQYLNE 713
P+ +NK +L+ NGV ID + D + ++ IP Y I+ I +
Sbjct: 394 PNFAYNKGELVCNGVLPIDQLR-DYIGPAGLVAERIP-----KYYIEAIYGIHIQTKSRD 447
Query: 714 KGHISYFLDASEFLKKFCTFRKFVSGGKGGQLNFSHATRIIIHDFISGKLLY 765
+G A E L + R +++ G G + A+R I+ D+++GKLLY
Sbjct: 448 EGGNGDIPTAQELLVAYARARGYMTQGY-GSADEPRASRYILKDYVNGKLLY 498
Score = 16.5 bits (31), Expect = 5.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 50 KKLSILNKDSLDDFL 64
K S+ + +LD+FL
Sbjct: 64 KLRSVTQESALDEFL 78
Score = 16.5 bits (31), Expect = 5.0
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 327 KYLYMYERLGEKYKRLNTNNSR 348
K LY+++RL + K N ++
Sbjct: 521 KDLYVFDRLPDTRKEQVQNAAK 542
Lambda K H
0.322 0.141 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1015
Number of extensions: 51
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 833
Length of database: 640
Length adjustment: 40
Effective length of query: 793
Effective length of database: 600
Effective search space: 475800
Effective search space used: 475800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.3 bits)
S2: 29 (15.8 bits)