Query= PF14_0301 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(289 letters)
>FBgn0012066 type=protein;
loc=3L:complement(15977486..15980708,
15980763..15980818); ID=FBpp0075277;
name=DNApol-delta-PA; parent=FBgn0012066,FBtr0075522;
dbxref=FlyBase:FBpp0075277,
FlyBase_Annotation_IDs:CG5949-PA,GB_protein:AAF49555.1,
GB_protein:AAF49555;
MD5=b37947694ade37471461aac102b200c8; release=r5.1;
species=Dmel; length=1092;
Length = 1092
Score = 35.4 bits (80), Expect = 6e-06
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 84 FIKN---LNLC----GKYTKTNGKEDDTFEVYSEYTTD-DMNIFSSVNVRNFAFKY-IHV 134
FI+N LN C G + KE + +S + + D +I + N+ NF F Y ++
Sbjct: 334 FIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNR 393
Query: 135 SSHPKYRNFKFGGLLEGNMDINNLQYSFGGAYTKHHKDNLYIFSLRSIPSNKHFYGSLAL 194
++H K RNF++ G ++ + ++ + ++N Y+ +P + F L
Sbjct: 394 AAHLKVRNFEYLGRIKNIRSV--IKEQMLQSKQMGRRENQYVNFEGRVPFDLLF----VL 447
Query: 195 NLFFQNKSINDNAISVEVIQNIMEKKANINVASIWYLDNKNTFVKTKIS 243
++ +S NA+S +Q E+K +++ + I L N + + +++
Sbjct: 448 LRDYKLRSYTLNAVSYHFLQ---EQKEDVHHSIITDLQNGDEQTRRRLA 493
Score = 19.6 bits (39), Expect = 0.33
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 94 YTKTNGKEDDTFEVYSE 110
YT+ NG E++ +Y +
Sbjct: 728 YTQANGYENNAVVIYGD 744
Score = 19.2 bits (38), Expect = 0.43
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 145 FGGLLEGNMDINNLQYS---FGGAYTK-HHKDNLYIFSLRSIPSNKHFYGS 191
F L M +NL Y+ GG K ++NL + P+N +F S
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQVERTPANNYFVKS 638
Score = 17.3 bits (33), Expect = 1.6
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 2 DFPKLLNK 9
DFP LLN+
Sbjct: 386 DFPYLLNR 393
Score = 15.0 bits (27), Expect = 8.1
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 145 FGGLLEGN 152
FG +EGN
Sbjct: 108 FGVTMEGN 115
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 690
Number of extensions: 35
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 6
Length of query: 289
Length of database: 1092
Length adjustment: 36
Effective length of query: 253
Effective length of database: 1056
Effective search space: 267168
Effective search space used: 267168
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)