Query= PF14_0335 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein, conserved
(190 letters)
>YGL231C YGL231C SGDID:S000003200, Chr VII from 63620-63048, reverse
complement, Uncharacterized ORF, "Putative protein of
unknown function; green fluorescent protein (GFP)-fusion
protein localizes to the endoplasmic reticulum"
Length = 190
Score = 38.1 bits (87), Expect = 1e-07
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 75 AWGICVNSFKGLLMNLFVMFMXXXXXXXXXXXXXVYSIYNILKSLININDVFKTVENNKT 134
AW I + K + MN+F+ +M + + +K++ + FK V NK
Sbjct: 73 AWQIALQPAKSIPMNIFMSYMSGTSLQIIPIMTALMLLSGPIKAIFSTRSAFKPVLGNKA 132
Query: 135 EKFLLQKICF-FIMNCLVLLYIMSVCSNS-GLLPIRSGDYFYFIPHQKI 181
+ +Q F +I+ VL+YI NS GL+P GD+ +P ++I
Sbjct: 133 TQSQVQTAMFMYIVFQGVLMYIGYRKLNSMGLIPNAKGDW---LPWERI 178
Lambda K H
0.326 0.141 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 190
Length adjustment: 20
Effective length of query: 170
Effective length of database: 170
Effective search space: 28900
Effective search space used: 28900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.3 bits)
S2: 18 (11.5 bits)