>YDR050C TPI1 SGDID:S000002457, Chr IV from 556469-555723, reverse
           complement, Verified ORF, "Triose phosphate isomerase,
           abundant glycolytic enzyme; mRNA half-life is regulated
           by iron availability; transcription is controlled by
           activators Reb1p, Gcr1p, and Rap1p through binding sites
           in the 5' non-coding region"
          Length = 248

 Score =  215 bits (548), Expect = 6e-61
 Identities = 104/247 (42%), Positives = 162/247 (65%), Gaps = 2/247 (0%)

Query: 1   MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQS-KF 59
           MAR +FV  N+K NG+ +SIK +    N     P  ++VV+ P + + D++  L++  + 
Sbjct: 1   MARTFFVGGNFKLNGSKQSIKEIVERLNTASI-PENVEVVICPPATYLDYSVSLVKKPQV 59

Query: 60  STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
           + G QN     +G++TGE S +  KD+  ++VI+GH ERR YFHE D+ + +K + +L  
Sbjct: 60  TVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQ 119

Query: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPE 179
            +  ++C GE+LE+++  KT++V+ +Q+ A ++ + ++ NV++AYEP+WAIGTG  ATPE
Sbjct: 120 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPE 179

Query: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
            AQ +H  IRK +    G+K A+++RILYGGS N  N  +   + D+DGFLVG ASLK  
Sbjct: 180 DAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE 239

Query: 240 FVDIIKS 246
           FVDII S
Sbjct: 240 FVDIINS 246

Lambda     K      H
   0.317    0.133    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 184
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 248
Length adjustment: 24
Effective length of query: 224
Effective length of database: 224
Effective search space:    50176
Effective search space used:    50176
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)