Query= PF14_0391 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal protein L1, putative (217 letters)
>YGL135W RPL1B SGDID:S000003103, Chr VII from 254646-255299,
           Verified ORF, "N-terminally acetylated protein component
           of the large (60S) ribosomal subunit, nearly identical
           to Rpl1Bp and has similarity to E. coli L1 and rat L10a
           ribosomal proteins; rpl1a rpl1b double null mutation is
           lethal"
          Length = 217

 Score =  203 bits (517), Expect = 2e-57
 Identities = 96/217 (44%), Positives = 152/217 (70%), Gaps = 1/217 (0%)

Query: 1   MSKLNQDLLKKAISDVFEGTKQ-KKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVR 59
           MSK+    +++ + ++ + + + KKR F+ET+ELQ+GLK+YD QRDKRFSG+++L N  R
Sbjct: 1   MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPR 60

Query: 60  KKLKVCILGDAVHVEEAQKLELDYMDIEAMXXXXXXXXXXXXXXXXYDAFLASQVILPQI 119
             + +CI GDA  V+ A+   +D M ++ +                Y+AF+AS+V++ Q+
Sbjct: 61  PNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQV 120

Query: 120 PKLLGPGLNKAGKFPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELR 179
           P+LLGP L+KAGKFP+ ++HND +  K+ +++S+IKFQLKKVLC+ V VG+  ++E+ L 
Sbjct: 121 PRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLV 180

Query: 180 SNIVHAINFLVSLLKKNWQNIRTLHIKSTMGKPQRIY 216
           + I+ ++NF VSLLKKNWQN+ +L +KS+MG   R+Y
Sbjct: 181 NQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
Lambda     K      H
   0.319    0.136    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 163
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 217
Length adjustment: 22
Effective length of query: 195
Effective length of database: 195
Effective search space:    38025
Effective search space used:    38025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)