>YPR033C HTS1 SGDID:S000006237, Chr XVI from 639016-637376, reverse
           complement, Verified ORF, "Cytoplasmic and mitochondrial
           histidine tRNA synthetase; encoded by a single nuclear
           gene that specifies two messages; efficient
           mitochondrial localization requires both a presequence
           and an amino-terminal sequence "
          Length = 546

 Score =  273 bits (699), Expect = 2e-77
 Identities = 158/379 (41%), Positives = 221/379 (58%), Gaps = 43/379 (11%)

Query: 592 INFNLKTAKGCKDFTGEDMQLRNIFFEYIKKKFLLHGAVEIDTPIFELKETLMNKYGEDS 651
           +  +LKT KG KD+   DM +R   F  +   F  HG V IDTP+FEL+E L  KYGEDS
Sbjct: 51  LQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKYGEDS 110

Query: 652 KLIFDLKDQGGESLSLRYDLTVPLYRFINTNNVSHLKRFHIGKVYRRDEPSMNRGRFREF 711
           KLI++L+DQGGE  SLRYDLTVP  R++  NN+  +KR+HI KVYRRD+P+M +GR REF
Sbjct: 111 KLIYNLEDQGGELCSLRYDLTVPFARYVAMNNIQSIKRYHIAKVYRRDQPAMTKGRMREF 170

Query: 712 YQCDFDIVGKFDTLRTDFHILYIFWDILYNLRNVLGNFKCKLNHRKILEYMLLSCNIHKD 771
           YQCDFD+ G F+++  D   L I  + L +L   + +FK KLNHRKIL+ +     +  +
Sbjct: 171 YQCDFDVAGTFESMVPDSECLSILVEGLTSLG--IKDFKIKLNHRKILDGIFQIAGVKDE 228

Query: 772 KVKTVSSSIDKLDKITFQQFRDELLNDKGIHIEAIDKIEQYISKTLSLSPFLVIEFLRND 831
            V+ +SS++DKLDK  ++  + E+  +KG   E  DKI +Y+    SL     I  + + 
Sbjct: 229 DVRKISSAVDKLDKSPWEAVKKEMTEEKGQSEETADKIGEYVKLNGSLKE---IHAVLSA 285

Query: 832 LKESTLNEEYKLEIQNCINHLEQIFDLLKH---FNMLNQFSFDLSLARGLDYYTGIIFEF 888
               T NE+ K         L+ I  L+K+   F++ +  SFDLSLARGLDYYTG+I+E 
Sbjct: 286 DANITSNEKAK-------QGLDDIATLMKYTEAFDIDSFISFDLSLARGLDYYTGLIYEV 338

Query: 889 VLLSE----------------------TNVGSVAAGGRYDFLIR------NKRREYLPSV 920
           V  +                         VGS+AAGGRYD L+        K+   +P V
Sbjct: 339 VTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVNMFSEASGKKSTQIPCV 398

Query: 921 GASIGIERIITIAEEFIRT 939
           G S G+ERI ++ ++ I +
Sbjct: 399 GISFGVERIFSLIKQRINS 417

 Score = 24.6 bits (52), Expect = 0.021
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 1030 EIVELCTKLWENDISTEFTYVKDQKIQKQLVYALEKQIPLVLIIG-DEIEQGIVKLREIT 1088
            E +++  +LW+  I  E+ Y      +KQ   A +    + +I+G +E  +G ++++ + 
Sbjct: 445  ERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKRLG 504

Query: 1089 LDKDKSTGE 1097
             +     GE
Sbjct: 505  QEFADDDGE 513

 Score = 16.9 bits (32), Expect = 4.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 573 YFSPYKYEEELNEILLPKNINFNLKTAKGCKD 604
           Y++   YE   +    P+N +   K AK  +D
Sbjct: 330 YYTGLIYEVVTSASAPPENASELKKKAKSAED 361

 Score = 16.2 bits (30), Expect = 7.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 356 DNLLNMCKNIMPLYIEKLNE 375
           D  L    +I+P+  EKL++
Sbjct: 511 DGELVSAADIVPIVQEKLSQ 530

Lambda     K      H
   0.322    0.139    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1152
Number of extensions: 60
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 1132
Length of database: 546
Length adjustment: 41
Effective length of query: 1091
Effective length of database: 505
Effective search space:   550955
Effective search space used:   550955
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.3 bits)
S2: 29 (15.8 bits)