>YHR169W DBP8 SGDID:S000001212, Chr VIII from 442182-443477,
           Verified ORF, "Putative ATP-dependent RNA helicase of
           the DEAD-box family involved in biogenesis of the 40S
           ribosomal subunit"
          Length = 431

 Score =  125 bits (313), Expect = 6e-33
 Identities = 116/465 (24%), Positives = 202/465 (43%), Gaps = 91/465 (19%)

Query: 258 KPTEIQSKTLEKSINDKNDIVVISKTGTGKTLTFCLPXXXXXXXXXXXXXXXXXXXXXXF 317
           +PT IQ   + K +  + D +  +KTG+GKT+ F  P                       
Sbjct: 24  QPTAIQKACIPKILEGR-DCIGGAKTGSGKTIAFAGPMLTKWSEDPSGMFG--------- 73

Query: 318 RCLILVPTRELALQILKHFNYINKYINLFISTIIGGLNLNKQKRILMKKPEILICTPGRL 377
             ++L PTRELA+QI + F  +   +N+ +S I+GG ++ +Q   L +KP  +I TPGRL
Sbjct: 74  --VVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRL 131

Query: 378 KYFLHLENPIKYIYQMKNIRYLVCDEIDKMIEISFMKDISYIAKHIYKSVGDKKKKLIQT 437
            + + + +    +  +   +YLV DE D ++  +F   ++        ++  K K+  QT
Sbjct: 132 AHHI-MSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCIS----ALPPKDKR--QT 184

Query: 438 FLLSATLSLTVQ-LQNDNMTKLLNSIIIRKDKSFIINLSNEQNVYNDNSNILPELLTLYI 496
            L +AT++  V+ LQN  + K        K   F   + +  NV       +P  L +  
Sbjct: 185 LLFTATITDQVKSLQNAPVQK-------GKPPLFAYQVESVDNV------AIPSTLKIEY 231

Query: 497 VKLNERDIVCKLFYLIKSYFSYDIXXXXXXXXXXXXKWEHPQDTHQNDEINKIIIFVNTI 556
           + + E          +K  + Y +                   T +  E    IIFVN  
Sbjct: 232 ILVPEH---------VKEAYLYQLL------------------TCEEYENKTAIIFVNRT 264

Query: 557 KSAKQLNAIFKHLFLHNNLESSIPKKYRSNLYIKNKVNIYSIHSKQKLKERLENINKFSQ 616
            +A+ L    K L                      +V + S+HS+   +ER  ++++F +
Sbjct: 265 MTAEILRRTLKQL----------------------EVRVASLHSQMPQQERTNSLHRF-R 301

Query: 617 QNHKAILFCTDVLSRGIDLDKCDLIIQLNCPISDITFVHRSGRTARNFKKGKCICFITET 676
            N   IL  TDV SRG+D+   +L++  + P     F+HRSGRTAR  + G  I F+T+ 
Sbjct: 302 ANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVTQR 361

Query: 677 EIYKWKTSLEKVGINIQDLQELDYLKSINEEDYAKINKAIECANK 721
           ++ + +   +++   + +  ++         D A I KA+    K
Sbjct: 362 DVSRIQAIEDRINKKMTETNKV--------HDTAVIRKALTKVTK 398

Lambda     K      H
   0.319    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 526
Number of extensions: 20
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 796
Length of database: 431
Length adjustment: 36
Effective length of query: 760
Effective length of database: 395
Effective search space:   300200
Effective search space used:   300200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.3 bits)
S2: 27 (15.0 bits)